CK934052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934052 vs. ExPASy Swiss-Prot
Match: RL27A_DROME (60S ribosomal protein L27a OS=Drosophila melanogaster GN=RpL27A PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.765e-14 Identity = 42/85 (49.41%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 5 RNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 250 ++KF P +N+DKLWS+V + A+ K+ P+ID+ +FGY+K+LG+G LP +PV+VKAK SK AE KIK+AGG +L+A Sbjct: 67 QHKFR-PEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
BLAST of CK934052 vs. ExPASy Swiss-Prot
Match: RL28B_SCHPO (60S ribosomal protein L28-B OS=Schizosaccharomyces pombe GN=rpl28b PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14 Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 250 ++N P VN+D+LW++VP + + K N P+I+V Q GY KVLGKG LP+ PV+++ + VS+ AE+KIK+AGG V L A Sbjct: 64 MKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDT-PVIIQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of CK934052 vs. ExPASy Swiss-Prot
Match: RL28A_SCHPO (60S ribosomal protein L28-A OS=Schizosaccharomyces pombe GN=rpl28a PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 3.932e-14 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 2 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 250 ++N P VN+D+LW+++P + + K N P+I+V Q GY KVLGKG LPE PV+V+ + VS+ AE+KIK+AGG V L A Sbjct: 64 MKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET-PVIVQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of CK934052 vs. ExPASy Swiss-Prot
Match: RL27A_ERYGR (60S ribosomal protein L27a OS=Erysiphe graminis subsp. hordei PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 39/85 (45.88%), Postives = 58/85 (68.24%), Query Frame = 2 Query: 8 NKFHCPIVNIDKLWSMVPQDVK----AKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 250 N F P++N++KLWS++P + + + + D +P+ID+ GY KVLGKG +P+ P+VV+A+ SK AE+KI EAGG V L A Sbjct: 66 NHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPK-VPLVVRARWFSKEAERKITEAGGVVELVA 149
BLAST of CK934052 vs. ExPASy Swiss-Prot
Match: RL27A_TRYBB (60S ribosomal protein L27a OS=Trypanosoma brucei brucei GN=RPL27A PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.314e-11 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 23 PIVNIDKLWSMVPQDVKAKASKDNV-PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 250 P +N+D L ++ +D KA K V P+ID+ GY K+LG G L P +VKA+ VSK A+KKI++AGGAVVL A Sbjct: 71 PTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAPCIVKARWVSKLADKKIRKAGGAVVLQA 145 The following BLAST results are available for this feature:
BLAST of CK934052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934052 ID=CK934052; Name=CK934052; organism=Citrus sinensis; type=EST; length=449bpback to top |