CK934055

Overview
NameCK934055
Unique NameCK934055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2138 contig Csv1_Contig2138:4..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.664e-78
Identity = 129/194 (66.49%), Postives = 157/194 (80.93%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRA 734
            F QD D+TWGD R  I N G LL+L LD+ SGSGFQSK +YL+G++DMQ+KLV G+SAGTVT +YL SQG T DEIDFEFLGNVSG PYI+HTN++ QGKG+REQQFYL FDPT  FH YS++W P H++F +D  PIR FKN E LGV +PKNQPM++Y SLWNADDWATRGGLVKT+W++ PF A + N+ +
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNS 221          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.849e-76
Identity = 127/198 (64.14%), Postives = 162/198 (81.82%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIF-NGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F++D  + WGD R KI  N G LLSLSLD+ SGSGFQS +++L+G++++Q+KLV G+SAGTVT +YL S G T DEIDFEFLGN+SG PY LHTN++ +G G++EQQF+L FDPT +FHTY +IW PQ VIF +D IPIR FKN+E+LGVPFPK+QPM++Y+SLW A+ WATRGGL KTDW+KAPFTA+YRN+    C
Sbjct:   29 FHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDAC 226          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.103e-74
Identity = 127/198 (64.14%), Postives = 157/198 (79.29%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIF-NGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F++D  + WGD R KI  N G+LLSLSLD+ SGSGFQS +++L+G+ ++Q+KLV G+SAGTVT +YL S G T DEIDFEFLGN+SG PY LHTN++ +G G++EQQF+L FDPT NFHTY + W PQ +IF VD IPIR F NAES GVPFP  QPM++Y+SLW A+ WATRGGL KTDW+KAPFTAYYRN+    C
Sbjct:   24 FHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGC 221          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.150e-74
Identity = 124/198 (62.63%), Postives = 159/198 (80.30%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFN-GGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F++D  + WGD R K+ +  G+LLSLSLD+ SGSGFQS +++L+G+ ++Q+KLV G+SAGTVT +YL S G T DEIDFEFLGN+SG PY LHTN++ +G G++EQQF+L FDPT NFHTY + W PQ +IF VD IPIR FKN+ES+GVPFP  QPM++Y+SLW A+ WATRGGL KTDW+KAPFTA+YRN+    C
Sbjct:   29 FHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGC 226          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.338e-74
Identity = 124/198 (62.63%), Postives = 158/198 (79.80%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFN-GGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F++D  + WGD R KI +  G+LLSLSLD+ SGSGFQS +++L+G+ ++Q+KLV G+SAGTVT +YL S G T DEIDFEFLGN+SG PY LHTN++ +G G++EQQF+L FDPT NFHTY + W PQ +IF VD IPIR FKN E++GVPFP  QPM++Y+SLW A+ WATRGGL KTDW+KAPFTA+YRN+    C
Sbjct:   29 FHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGC 226          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 9.663e-71
Identity = 123/197 (62.44%), Postives = 148/197 (75.13%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW     K FNGG  + L LD+ +G+GFQ+K  YLFG   M +K+V GDSAGTVTA+ LSSQ   HDEIDFEFLGN +GQPYIL TN+F  GKG+REQ+ YL FDPT+ +H YSV+W    ++FLVDNIPIRVFKN + LGV FP NQPMK+Y+SLWNADDWATRGGL KTDW+KAPF A Y+ F    C
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGC 228          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.153e-70
Identity = 120/197 (60.91%), Postives = 149/197 (75.63%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F+++++ +W     K  +GG  + L LDR SG+GFQSK+ YLFG   M+LKLV GDSAG VTA+YLSS    HDEIDFEFLGN +GQPYIL TN+F  GKG+REQ+ YL FDPT+ +H+YSV+W    ++  VD++PIR FKN++ LGV FP NQPMKIYSSLW+ADDWATRGGL KTDW+ APFTA Y +F    C
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGC 228          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.672e-70
Identity = 121/197 (61.42%), Postives = 148/197 (75.13%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F +++  TW     K FNGG  + L LD+ +G+GFQSK  YLFG   M +K+V GDSAGTVTA+YLSSQ   HDEIDFEFLGN +GQPYIL TN+F  GKG+REQ+ YL FDPT+ +H YS++W    ++F VD +PIRVFKN++ LGV FP +QPMKIY+SLWNADDWATRGGL KTDW+KAPF A Y+ F    C
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGC 229          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.264e-70
Identity = 119/197 (60.41%), Postives = 147/197 (74.62%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F+++++ +W     K  NGG    L LDR SG+GFQSK+ YLFG   M+++LV GDSAG VTA+YLSS    HDEIDFEFLGN +GQPYIL TN+F  GKGNREQ+ YL FDPT+ +H+YSV+W    ++  VD++PIR FKN++ LGV FP NQPMKIYSSLW+ADDWATRGGL KT+W  APFTA Y +F    C
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGC 229          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.822e-69
Identity = 126/227 (55.51%), Postives = 158/227 (69.60%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCNNCGXXXXXXXXXXDAQRQWQARD--ELDA 827
            F +++  TW     K  NGG  + L LD+ +G+GFQSK  YLFG   M +K+VAGDSAGTVTA+YLSSQ   HDEIDFEFLGN +GQPYIL TN+F  G GNREQ+  L FDP++++H+YSV+W    ++F VD++PIRVFKN++ +GV FP NQPMKIYSSLWNADDWATRGGL KT+W KAPF A YR F     + C             +R W  ++  +LDA
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHV---DGCEASVNAKFCETQGKRWWDQKEFQDLDA 255          
The following BLAST results are available for this feature:
BLAST of CK934055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
XTH21_ARATH3.664e-7866.49Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH5.849e-7664.14Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH1.103e-7464.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH7.150e-7462.63Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH9.338e-7462.63Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN9.663e-7162.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC2.153e-7060.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN3.672e-7061.42Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC6.264e-7060.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.822e-6955.51Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_A03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934055 ID=CK934055; Name=CK934055; organism=Citrus sinensis; type=EST; length=832bp
GGGGACAAGGTTTTCAAACAGACAGCTTCTCTCTCTTGTTGTGTTATAAC
TCATACAGCAAATTAAGAACTATGGGTTATCATTATTCTTGTAATGGGTT
GTTGTTATTGGTGAGTGTTTTGATGGTTGTTGCCTCATCAGCTGTGGGTA
GCTTCTATCAAGACTTTGATTTAACATGGGGTGATAAGAGAGCTAAGATT
TTCAATGGCGGCCAACTTCTTTCTCTGTCTCTAGACAGAGTTTCTGGCTC
TGGTTTTCAGTCCAAGAGAGACTACTTATTTGGCAGAATTGATATGCAGC
TCAAGCTTGTTGCTGGTGACTCTGCTGGCACTGTCACTGCCTACTATCTG
TCTTCGCAAGGGCCGACTCATGATGAGATTGATTTTGAGTTCTTGGGAAA
TGTGAGCGGTCAGCCTTACATTCTTCACACAAATATATTCGCTCAGGGTA
AAGGCAACCGGGAGCAACAATTCTATCTCCGGTTTGATCCCACAAGAAAC
TTCCACACTTACTCCGTCATCTGGAAGCCCCAACACGTCATCTTCTTGGT
AGATAACATTCCCATTAGGGTGTTCAAAAATGCTGAATCTCTTGGAGTTC
CCTTCCCTAAAAACCAACCAATGAAGATTTACTCAAGTCTTTGGAATGCT
GATGACTGGGCTACAAGAGGAGGGTTGGTGAAAACTGACTGGACTAAGGC
TCCTTTCACAGCATATTACCGTAACTTCAGAGCCATTCCCTGTAACAACT
GTGGCTCTAAATGGTCATCAAGCTCCTCAGTTTCGGATGCTCAGCGTCAA
TGGCAGGCTAGAGACGAGCTTGATGCCACAAG
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