CK934055

Overview
NameCK934055
Unique NameCK934055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.311e-56
Identity = 101/203 (49.75%), Postives = 143/203 (70.44%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGG---QLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSS-QGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCNN 749
            FY+ FD+       ++ +     Q ++L+LDR SGSGF SK  YLFG   +Q+KLV G+SAGTVT++YLSS +G  HDEID EF+GN+SG PY+++TN++A G G +E QFYL FDPT +FHTY +IW PQ++IF VD++P+R FK  + L   +P+++PM+++++LW+   WATR G VK DW+ APF   YR +    C N
Sbjct:   28 FYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLA--YPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVN 228          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.163e-54
Identity = 95/198 (47.98%), Postives = 141/198 (71.21%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCN 746
            F Q++ +TWG       + G+ + L +D+ SG GF+SK  Y  G  +M++K+ +G++ G VTA+YL+S+G  HDEIDFEFLGN +G+P  L TN+F  G+GNRE++F L F+PT+++HTY ++W P  ++F VDNIPIRV+KN    GV +P ++PM++ +SLWN DDWAT GG  K +W+ +PF A++R+F    CN
Sbjct:   35 FGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNEN--GVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCN 229          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.402e-53
Identity = 99/199 (49.75%), Postives = 134/199 (67.34%), Query Frame = 3
Query:  162 DFDL----TWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCN 746
            DFD+    TWG       N G+ + LS+D  SGSGF+SK  Y  G   M++KL   DSAG VTA+YL+S+G THDE+DFEFLGN  G+P  + TN+F+ G+G REQ+F   FDPT +FHTY ++W P  ++F VD +PIRVFKN +  GV +P ++PM++ +SLWN ++WAT GG  K +W  APF A Y+ F    C+
Sbjct:   31 DFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCH 228          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.238e-51
Identity = 96/207 (46.38%), Postives = 137/207 (66.18%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC------NNCG 755
            F  ++ +TWG       N G+ + LSLD  SGSGF+SK  Y  G   +++K+   D++G VTA+YL+S+G THDE+DFEFLGN  G+   + TN+F  GKGNREQ+  L FDP+++FHTY+++W P  ++  VDNIP+RVFKN  S G+ +P ++PM++  SLWN ++WAT GG  K +W+ APF A ++ F    C      N CG
Sbjct:   39 FDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACG 243          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.678e-41
Identity = 85/205 (41.46%), Postives = 123/205 (60.00%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPT---HDEIDFEFLGNVSGQPYILHTNIFAQGKGN-----REQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            FY+ F   WG +  ++      L++ LDR SGSGF+S + +  G     +KL  G +AG +T+ YLS+       HDE+D EFLG   G+PY L TN++ +G G+     RE +F L FDPT++FH Y+++W P+ +IFLVD+IPIR +    +   P    +PM +Y S+W+A  WAT  G  K D+   PFTA Y NF+A+ C
Sbjct:   43 FYKGFRNLWGPQHQRMDQNA--LTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPL---RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGC 242          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.152e-39
Identity = 81/205 (39.51%), Postives = 119/205 (58.05%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGP---THDEIDFEFLGNVSGQPYILHTNIFAQGKGNR-----EQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPC 743
            F ++F   WG +  +      +++L LD+ +GSGF+S R Y  G     +KL  G +AG  T+ YLS+       HDE+D EFLG   G+PY L TN+F +G G+R     E +F L FDPT++FH Y+++W P  ++F VD++PIR +        P    +PM +Y S+W+A DWAT  G +K D+   PF A Y+NF+   C
Sbjct:   39 FDREFRTLWGSQHQR--REQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFP---TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGC 238          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.322e-38
Identity = 80/194 (41.24%), Postives = 117/194 (60.31%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQG---PTHDEIDFEFLGNVSGQPYILHTNIFAQGKGN--REQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYY 719
            F + +   +GD+   +   G+ + L+LD  +GSGF S   YL G     +KL A  SAG V A+YLS+       HDEIDFEFLGN+ G+ + + TNI+  G  +  RE+++ L FDPT +FH YS++W   H+IF VDN+PIR  K   S+G  FP  +PM +YS++W+   WAT GG    ++  AP+ + +
Sbjct:   31 FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQF 223          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.990e-37
Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = 3
Query:  153 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQG---PTHDEIDFEFLGNVSGQPYILHTNIFAQGK--GNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYY 719
            F + +   +GDK   +   G+ + L+LD  +GSGF S   YL G     +KL +  +AG V A+Y+S+       HDEIDFEFLGN+  + + + TNI+  G     RE+++ L FDPT +FH YS++W   H+IF VDN+PIR  K    +G  FP ++PM +Y+++W+   WAT GG    ++  AP+ A +
Sbjct:   31 FEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARF 223          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.656e-36
Identity = 74/179 (41.34%), Postives = 112/179 (62.57%), Query Frame = 3
Query:  225 LSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQG---PTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNR--EQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCN 746
            L LDR +GSGF S   Y  G     +KL A  +AG V A+Y S+      THDE+D EFLGN+ G+P+   TN++  G  +R  E+++ L FDP++ FH YS++W P  +IF VD++PIR     +++G  +P  +PM +Y+++W+A DWAT GG  K ++  APF A +++F    C+
Sbjct:   56 LLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCS 233          
BLAST of CK934055 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.545e-35
Identity = 73/184 (39.67%), Postives = 109/184 (59.24%), Query Frame = 3
Query:  210 GQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGP---THDEIDFEFLGNVSGQPYILHTNIFAQG--KGNREQQFYLRFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWTKAPFTAYYRNFRAIPCN 746
            G L  L+LD+ SG+G  SK  Y +G    +LKL AG ++G V A+YLS+      +HDEID E LG      + + TN++A G  +  RE++FY  FDPT+ FH Y++IW   H +FLVDNIP+R F N  +    +P ++PM +Y ++W+  +WAT+GG    ++  APF     +     C+
Sbjct:   60 GSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCS 242          
The following BLAST results are available for this feature:
BLAST of CK934055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
XTH8_ORYSJ2.311e-5649.75Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH3_ARATH2.163e-5447.98Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH2_ARATH1.402e-5349.75Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH2.238e-5146.38Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH4.678e-4141.46Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH1.152e-3939.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH6.322e-3841.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH6.990e-3739.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH2.656e-3641.34Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH8.545e-3539.67Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_A03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934055 ID=CK934055; Name=CK934055; organism=Citrus sinensis; type=EST; length=832bp
GGGGACAAGGTTTTCAAACAGACAGCTTCTCTCTCTTGTTGTGTTATAAC
TCATACAGCAAATTAAGAACTATGGGTTATCATTATTCTTGTAATGGGTT
GTTGTTATTGGTGAGTGTTTTGATGGTTGTTGCCTCATCAGCTGTGGGTA
GCTTCTATCAAGACTTTGATTTAACATGGGGTGATAAGAGAGCTAAGATT
TTCAATGGCGGCCAACTTCTTTCTCTGTCTCTAGACAGAGTTTCTGGCTC
TGGTTTTCAGTCCAAGAGAGACTACTTATTTGGCAGAATTGATATGCAGC
TCAAGCTTGTTGCTGGTGACTCTGCTGGCACTGTCACTGCCTACTATCTG
TCTTCGCAAGGGCCGACTCATGATGAGATTGATTTTGAGTTCTTGGGAAA
TGTGAGCGGTCAGCCTTACATTCTTCACACAAATATATTCGCTCAGGGTA
AAGGCAACCGGGAGCAACAATTCTATCTCCGGTTTGATCCCACAAGAAAC
TTCCACACTTACTCCGTCATCTGGAAGCCCCAACACGTCATCTTCTTGGT
AGATAACATTCCCATTAGGGTGTTCAAAAATGCTGAATCTCTTGGAGTTC
CCTTCCCTAAAAACCAACCAATGAAGATTTACTCAAGTCTTTGGAATGCT
GATGACTGGGCTACAAGAGGAGGGTTGGTGAAAACTGACTGGACTAAGGC
TCCTTTCACAGCATATTACCGTAACTTCAGAGCCATTCCCTGTAACAACT
GTGGCTCTAAATGGTCATCAAGCTCCTCAGTTTCGGATGCTCAGCGTCAA
TGGCAGGCTAGAGACGAGCTTGATGCCACAAG
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