CK934057

Overview
NameCK934057
Unique NameCK934057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_CAMJD (Transaldolase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=tal PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.238e-22
Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 3
Query:  378 DLLPLIASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLS-------RVYSVASFFVSR 902
            + L L++  + G TSNPAIF+ AI +S  Y ++  +L   GK  +  Y EL I DIQ A      ++ + N  DG++S+E+ PRL D+T  ++  AK L+  + + NV IKIPAT      + E++  GISVN TLIFSL + ++  +A   GL     ++++          +V S FVSR
Sbjct:   19 EFLNLLSHEINGATSNPAIFKNAILNSPIYKDKILKL--KGKKTKDIYEELAISDIQKAADKLAPLFYQKN--DGFISIEIDPRLHDNTTLSLGEAKRLYSAIGKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKCFEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSR 196          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_HELPJ (Transaldolase OS=Helicobacter pylori J99 GN=tal PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 69/190 (36.32%), Postives = 99/190 (52.11%), Query Frame = 3
Query:  342 SPWYDNLCRPV--TDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVYSVASFFVSR 902
            S W D + R     D L LI  G + G TSNP++F +AI+ S  Y ++  +L   GK  +  Y  L +KDI  A      +Y E +  +GY+S+E+ P L DD   +++ AK L K +NRPNV IK+PA+      I  +    I +NVTL+FS           + G  A  L+  +R  +V S FVSR
Sbjct:    5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYQDEIAKL--KGKKAKEIYETLALKDILQASSALMPLY-EKDPNNGYISLEIDPFLEDDAIKSIDEAKRLFKTLNRPNVMIKVPASESAFEVISALAQASIPINVTLVFS---------PKIAGEIAQILAKEARKRAVISVFVSR 182          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_HELPY (Transaldolase OS=Helicobacter pylori GN=tal PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.571e-19
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3
Query:  342 SPWYDNLCRPV--TDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVYSVASFFVSR 902
            S W D + R     D L LI  G + G TSNP++F +AI+ S  Y ++  +L   GK  +  Y  L +KDI  A      +Y E +  +GY+S+E+ P L DD   +++ AK L K +NRPNV IK+PA+   +  +  +    I VNVTL+FS           + G  A  L+  ++  +V S FVSR
Sbjct:    5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYKDEIAKL--KGKKAKEIYETLALKDILQASSALMPLY-EKDPNNGYISLEIDPFLEDDAAKSIDEAKRLFKTLNRPNVMIKVPASESGIEVVSALTQASIPVNVTLVFS---------PKIAGEIAQILAKEAQKRAVISVFVSR 182          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_HELP2 (Transaldolase OS=Helicobacter pylori (strain P12) GN=tal PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.571e-19
Identity = 69/190 (36.32%), Postives = 99/190 (52.11%), Query Frame = 3
Query:  342 SPWYDNLCRPV--TDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVYSVASFFVSR 902
            S W D + R     D L LI  G + G TSNP++F +AI+ S  Y ++  +L   GK  +  Y  L +KDI  A      +Y E N  +GY+S+E+ P L DD   +++ AK L K +NRPNV IK+PA+      I  +    I +NVTL+FS           + G  A  L+  ++  +V S FVSR
Sbjct:    5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYQDEIAKL--KGKKAKEIYETLALKDILQASSALMPLY-EKNPNNGYISLEIDPFLEDDAIKSIDEAKRLFKTLNRPNVMIKVPASTSGFEVISALAQASIPINVTLVFS---------PKIAGEIAQILAKEAQKRAVISVFVSR 182          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_HELPH (Transaldolase OS=Helicobacter pylori (strain HPAG1) GN=tal PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3
Query:  342 SPWYDNLCRPV--TDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVYSVASFFVSR 902
            S W D + R     D L LI  G + G TSNP++F +AI+ S  Y ++  +L   GK  +  Y  L +KDI  A      +Y E +  +GY+S+E+ P L DD   +++ AK L K +NRPNV IK+PA+   +  I  +    I +NVTL+FS           + G  A  L+  ++  +V S FVSR
Sbjct:    5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYQDEIAKL--KGKKAKEIYETLALKDILQASSALMPLY-EKDPNNGYISLEIDPFLEDDAIKSIDEAKRLFKTLNRPNVMIKVPASESGLEVISALAQASIPINVTLVFS---------PKIAGEIAQILAKEAQKRAVISVFVSR 182          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_HELPS (Transaldolase OS=Helicobacter pylori (strain Shi470) GN=tal PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 58/154 (37.66%), Postives = 85/154 (55.19%), Query Frame = 3
Query:  342 SPWYDNLCRPV--TDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFS 794
            S W D + R     D L LI  G + G TSNP++F +AI+ S  Y ++  +L   GK  +  Y  L +KDI  A      +Y E +  +GY+S+E+ P L DD   +++ AK L K +NRPNV IK+PA+   +  +  +    I VN TL+FS
Sbjct:    5 SLWCDFIERDFLENDFLKLINKGAICGATSNPSLFCEAITKSAFYKDEIAKL--KGKKAKEIYETLALKDILQASSALMPLY-EKDPNNGYISLEIDPFLEDDAPKSIDEAKRLFKTLNRPNVMIKVPASESGLEVVSALTKASIPVNATLVFS 155          
The following BLAST results are available for this feature:
BLAST of CK934057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TAL_CAMJD4.238e-2236.81Transaldolase OS=Campylobacter jejuni subsp. doyle... [more]
TAL_HELPJ1.968e-1936.32Transaldolase OS=Helicobacter pylori J99 GN=tal PE... [more]
TAL_HELPY2.571e-1935.79Transaldolase OS=Helicobacter pylori GN=tal PE=3 S... [more]
TAL_HELP22.571e-1936.32Transaldolase OS=Helicobacter pylori (strain P12) ... [more]
TAL_HELPH7.480e-1935.79Transaldolase OS=Helicobacter pylori (strain HPAG1... [more]
TAL_HELPS2.176e-1837.66Transaldolase OS=Helicobacter pylori (strain Shi47... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934057 ID=CK934057; Name=CK934057; organism=Citrus sinensis; type=EST; length=903bp
GGGGGTACTTGGTTGAAGCTTACAAATCGTCGCTCTTTATTTCTGAGTTT
TTAGATTCAAGGATCAACGAGTCTTTAATGGCGACCATTTCGAAGCTTAC
AAATCCAGCTGTTTCTTCATCATCTTTGAAACCCAGATCATCATCATCCT
CACTGCCTAAATCTTTGATCAGCCTTCAAACCAAAACTGGGTTCAATTCA
AAAGTTGCGTCTTCTCAGTTGACCCTCAGAAATAACCACCCTTTGAAGGC
CTCTTTGGTTGTGAAATGTTCCCAATCTGGTGGAAATGGAAGTAGTGCAA
AGAGGACAACTCTTCACGATCTCTATGAGCAGGAAGGGCAGAGCCCTTGG
TATGATAACCTTTGCCGCCCCGTCACAGATTTGCTTCCGCTCATTGCAAG
TGGTGTTAGGGGTGTTACCAGCAACCCTGCGATTTTCCAGAAAGCAATAT
CTTCATCGAATGCTTACAATAATCAATTTAGGGAACTTGTACAATCTGGA
AAAGATATTGAAGCTGCATATTGGGAACTTGTGATTAAGGACATTCAAGA
TGCATGCAAACTTTTTGAGTCAATCTATGATGAAACCAATGGCGGTGATG
GCTATGTTTCTGTCGAAGTTTCTCCCAGACTCGCTGATGATACCCAAGGG
ACTGTGGAGGCAGCAAAATGGCTTCACAAAGTGGTTAATCGCCCCAATGT
ATACATAAAGATACCTGCCACAGCTCCTTGCGTTCCTTCTATCAAGGAAG
TTATTTCGCAGGGCATTAGTGTCAATGTGACTCTCATATTCTCCCTGGCT
AGATATGAAGAAGTCATTGATGCTTACTTGGATGGCCTTGAGGCTTCTGG
GCTGAGTGACCTTTCCAGAGTTTACAGTGTTGCATCCTTTTTCGTTAGTC
GAG
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