CK934060

Overview
NameCK934060
Unique NameCK934060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX1_SOYBN (Alternative oxidase 1, mitochondrial OS=Glycine max GN=AOX1 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 4.291e-93
Identity = 151/195 (77.44%), Postives = 174/195 (89.23%), Query Frame = 3
Query:  285 FHAWETYRADLSIDLKKHHVPTTFLDKVAYRTVKLLRIPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLQDVITVIRA 869
            F  W TY+ADLSIDL+KH  PTTFLDK+A+ TVK+LR PTD+FFQRRYGCRAMMLETVAAVPGMV GMLLH KSLR+F+HSGGW KALLEEAENERMHLMT + + KPKWYER LV+TVQGVFFNA+F+ YLLSPK AHR+ GYLEEEAIHSYTE+LK++D G+IENVPAPAIAIDYW+LP  +TL+DV+ V+RA
Sbjct:   95 FSPWGTYKADLSIDLEKHMPPTTFLDKMAFWTVKVLRYPTDVFFQRRYGCRAMMLETVAAVPGMVAGMLLHCKSLRRFEHSGGWFKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMFGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPGSTLRDVVMVVRA 289          

HSP 2 Score: 43.1282 bits (100), Expect = 4.291e-93
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 1
Query:  220 SYWGISRPKITREDGSPWPWNCF 288
            SYWGI   KIT++DG+ W WNCF
Sbjct:   73 SYWGIQPSKITKKDGTEWKWNCF 95          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX3_ARATH (Alternative oxidase 3, mitochondrial OS=Arabidopsis thaliana GN=AOX3 PE=2 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 1.488e-90
Identity = 143/195 (73.33%), Postives = 170/195 (87.18%), Query Frame = 3
Query:  285 FHAWETYRADLSIDLKKHHVPTTFLDKVAYRTVKLLRIPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLQDVITVIRA 869
            F  W++Y+ D+SID+ KHH P+ F DK AY TV+ L+IP  LFFQR++ C AM+LETVAAVPGMVGGMLLHLKSLR+F+HSGGWIKALLEEAENERMHLMT + L +PKWYER +V TVQGVFFNA+F+ Y++SPKLAHR+ GYLEEEA++SYTE+LKDID+G  EN PAPAIAIDYWRLPKDATL+DV+ VIRA
Sbjct:   92 FQPWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQTLKIPVQLFFQRKHMCHAMLLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGVFFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAIDYWRLPKDATLRDVVYVIRA 286          

HSP 2 Score: 45.4394 bits (106), Expect = 1.488e-90
Identity = 18/29 (62.07%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  202 NGIVPSSYWGISRPKITREDGSPWPWNCF 288
            +G V S+YWGI   KIT+ DGS W WNCF
Sbjct:   64 DGKVISTYWGIPPTKITKPDGSAWKWNCF 92          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_CRYNV (Alternative oxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=AOX1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.029e-46
Identity = 98/208 (47.12%), Postives = 134/208 (64.42%), Query Frame = 3
Query:  345 PTTFLDKVAYRTVKLLR-------------IPTDLFFQR-----------------RYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWRLPKDATLQDVITVIRA 869
            P TF DK A+RTVK LR             +P  +  Q+                 ++  R ++LE++A VPGMVGG L HL+S+R  +  GGWI +LLEEAENERMHL+T + + +P  + R LVL  QGVF+NAFF+ YL+SP++AHR VG LEEEA+ +YT  + D+++G I   +++PAPAIAIDYWRLP  ++L DVI  +RA
Sbjct:  126 PVTFGDKAAHRTVKFLRKCFDLLTGYTPYEVPASVLAQKPIPIAELRSKGKLLSDQKWLFRIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEAENERMHLLTFMTIAQPGIFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRTYTHCISDMEAGLIPEWKDMPAPAIAIDYWRLPASSSLLDVIRAVRA 333          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_AJECA (Alternative oxidase, mitochondrial OS=Ajellomyces capsulata GN=AOX1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.407e-43
Identity = 94/203 (46.31%), Postives = 127/203 (62.56%), Query Frame = 3
Query:  336 HHVPTTFLDKVAYRTVKLLRIPTDL---------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            H     + D VA  TV+ LR  TDL                       +R++  R + LETVA VPGMVGGML HL+SLR+ +   GWI+ LLEEA NERMHL++ + L +P W+ R++VL  QGVFFN FF+ YL+SP+  HR VGYLEEEA+ +YT  +KD++SG +    N PAP IA+ YW++P+   T+ D++  IRA
Sbjct:  100 HREAKNWSDWVALGTVRFLRWATDLATGYRHAAPGKQGVEVPEQFQMTERKWVIRFIFLETVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPGWFMRLMVLGAQGVFFNGFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLPNWANQPAPDIAVAYWQMPEGKRTILDLLYYIRA 302          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_ASPNG (Alternative oxidase, mitochondrial OS=Aspergillus niger GN=aox1 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.032e-42
Identity = 89/200 (44.50%), Postives = 129/200 (64.50%), Query Frame = 3
Query:  336 HHVPTTFLDKVAYRTVKLLRIPTDL------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            H     + D VA  TV++LR   DL                    ++++  R + LE+VA VPGMVGGML HL+SLR+ +   GWI+ LLEEA NERMHL+T + L +P W+ R++VL  QGVFFN FF+ YL+SP++ HR VGYLEEEA+ +YT  +K+I++GS+   E   AP IA+ YW++P+   +++D++  +RA
Sbjct:   98 HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGAQGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPAWEKTEAPEIAVQYWKMPEGQRSMKDLLLYVRA 297          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_EMENI (Alternative oxidase, mitochondrial OS=Emericella nidulans GN=alxA PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 7.722e-42
Identity = 89/200 (44.50%), Postives = 128/200 (64.00%), Query Frame = 3
Query:  336 HHVPTTFLDKVAYRTVKLLRIPTDL------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            H     + D VA  +V+LLR   DL                    ++ +  R + LE+VA VPGMVGGML HL+SLR+ +   GWI+ LLEEA NERMHL+T + + +P W+ R++VL  QGVFFN FF+ YL+SP+  HR VGYLEEEA+ +YT  +KD++SG +   E + AP IA+ YW++P+ + T++D++  +RA
Sbjct:  101 HREAKNWSDWVALGSVRLLRWGMDLVTGYKHPAPGQEDIKKFQMTEKEWLRRFVFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMAEPGWFMRLMVLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLPHWEKLEAPEIAVKYWKMPEGNRTMKDLLLYVRA 300          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_PODAN (Alternative oxidase, mitochondrial OS=Podospora anserina GN=AOX1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.587e-39
Identity = 82/209 (39.23%), Postives = 127/209 (60.77%), Query Frame = 3
Query:  333 KHHVPTTFLDKVAYRTVKLLRIPTDL------------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI-----ENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            +H  P +  D +A++ V+L R  TD+                          + ++  R + LE++A VPGMV GML HL+SLR+ +   GWI+ LLEE+ NERMHL+T + + +P W+ + ++L  QGVFFNA F+ YL+SP++ HR VGYLEEEA+H+YT  +++I+ G +      N   P +A+ YW++P+   T++D+I  IRA
Sbjct:  102 QHRKPGSLSDWLAWKLVRLCRWGTDIATGIKPEQQVDKSNPTTAVAAQKPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLESLRRLKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFMKTMILGAQGVFFNAMFLSYLISPRITHRFVGYLEEEAVHTYTRCIREIEQGDLPKWSDPNFQIPDLAVTYWKMPEGKRTMRDLILYIRA 310          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_BLUGR (Alternative oxidase, mitochondrial OS=Blumeria graminis PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.991e-39
Identity = 82/208 (39.42%), Postives = 124/208 (59.62%), Query Frame = 3
Query:  336 HHVPTTFLDKVAYRTVKLLRIPTDL------------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPA-----IAIDYWRLPK-DATLQDVITVIRA 869
            H  P  F D++A   V+ LR  TDL                          +R++  R + LE+VA VPGMV GML HL SLR+ +   GWI+ LLEEA NERMHL+T + + KP W+ + +++  QGVFFN+ F+ YL+SP+  HR V YLEEEA+ +Y+  ++DI++G +    +P      +A+ YW++P+ + T++D++  IRA
Sbjct:   97 HRTPKDFSDRIALYLVRFLRFSTDLATGYKHDPVTITENGEKVLKKPYRMSERKWLIRMVFLESVAGVPGMVAGMLRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTFLKMAKPGWFMKFMIIGAQGVFFNSMFLSYLISPRTCHRFVAYLEEEAVLTYSTAIQDIEAGLLPKWTSPEFRIPDLAVQYWKIPEGNRTMRDLLLYIRA 304          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_VENIN (Alternative oxidase, mitochondrial OS=Venturia inaequalis GN=AOX1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.325e-38
Identity = 91/207 (43.96%), Postives = 123/207 (59.42%), Query Frame = 3
Query:  336 HHVPTTFLDKVAYRTVKLLRIPTDLFF------------------QRRYGC-------RAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSI---ENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            H     + DKVA   VKLLR   D                     Q+RYG        R + LE+VA VPGMV GML HL S+R+ +   GWI+ LLEE+ NERMHL+  + L +P W+ R+ VL  QGVFFNA F+ YL+SP+  HR VGYLEEEA+ +YT  L D+++G +   E + AP IA+DY+ LP+   T++D++  +RA
Sbjct:  101 HRDTRNWSDKVALIAVKLLRWGLDTVSGYKHGKAQALHAQDPQEAQKRYGMTGKQYLVRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDHGWIETLLEESYNERMHLLIFLKLYEPGWFMRLAVLGAQGVFFNAMFLSYLISPRTCHRFVGYLEEEAVVTYTRELADLEAGKLPEWETLAAPDIAVDYYNLPEGHRTMKDLLLHVRA 307          
BLAST of CK934060 vs. ExPASy Swiss-Prot
Match: AOX_GELSS (Alternative oxidase, mitochondrial OS=Gelasinospora sp. (strain S23) GN=aod-1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38
Identity = 95/248 (38.31%), Postives = 140/248 (56.45%), Query Frame = 3
Query:  216 VELLGYFEAKDH*RGWQSMALELFHAWETYRADLSIDLKKHHVPTTFLDKVAYRTVKLLRIPTDL------------------------FFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVGLVKPKWYERMLVLTVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSG-----SIENVPAPAIAIDYWRLPK-DATLQDVITVIRA 869
            V L  +F AK+     Q+      H W T    +S+ + +H  P T  D +A++ V++ R  TD+                          + ++  R + LE++A VPGMV GML HL SLR+ +   GWI+ LLEE+ NERMHL+T + + +P    + L+L  QGVFFNA F+ YL+SPK+ HR VGYLEEEA+H+YT  +++I+ G     S E    P +A+ YWR+P+   T++D+I  IRA
Sbjct:   63 VRLKDFFPAKETAYIRQTPPAWPHHGW-TEEEMISV-VPEHRKPETVGDWLAWKLVRICRWGTDIATGIRPEQQVDKNHPTTATSADKPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLKRDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAMFLSYLVSPKITHRFVGYLEEEAVHTYTRCIREIEEGHLPKWSDERFEIPEMAVRYWRMPEGKRTMKDLIYYIRA 308          
The following BLAST results are available for this feature:
BLAST of CK934060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
AOX1_SOYBN4.291e-9377.44Alternative oxidase 1, mitochondrial OS=Glycine ma... [more]
AOX3_ARATH1.488e-9073.33Alternative oxidase 3, mitochondrial OS=Arabidopsi... [more]
AOX_CRYNV3.029e-4647.12Alternative oxidase, mitochondrial OS=Cryptococcus... [more]
AOX_AJECA1.407e-4346.31Alternative oxidase, mitochondrial OS=Ajellomyces ... [more]
AOX_ASPNG2.032e-4244.50Alternative oxidase, mitochondrial OS=Aspergillus ... [more]
AOX_EMENI7.722e-4244.50Alternative oxidase, mitochondrial OS=Emericella n... [more]
AOX_PODAN3.587e-3939.23Alternative oxidase, mitochondrial OS=Podospora an... [more]
AOX_BLUGR7.991e-3939.42Alternative oxidase, mitochondrial OS=Blumeria gra... [more]
AOX_VENIN2.325e-3843.96Alternative oxidase, mitochondrial OS=Venturia ina... [more]
AOX_GELSS3.036e-3838.31Alternative oxidase, mitochondrial OS=Gelasinospor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934060 ID=CK934060; Name=CK934060; organism=Citrus sinensis; type=EST; length=870bp
GGGGTAGCGATGTCGGTGATGCGAGGGCTGATTAACGGCGGGAAGCACAG
TATCGGCTACGCAAGGACGGCGGTGAGATGTCATCCGAACGTTTGGGACG
GAGATGACATGCCGTTATTGGGGTTGAGAATGATGGTGATGATGAGTAGT
TATTCTTCTTCTTCGGAATCGGTGCCTGAGAAAGTGAAGGAGAAAGGAGA
GAACGGAATTGTACCGTCGAGTTATTGGGGTATTTCGAGGCCAAAGATCA
CTAGAGAGGATGGCAGTCCATGGCCTTGGAATTGTTTCATGCTTGGGAAA
CTTATCGGGCAGATTTATCAATTGATTTGAAGAAGCACCATGTGCCCACA
ACCTTCCTTGACAAAGTTGCTTACCGGACGGTCAAACTCCTCCGAATTCC
CACTGATTTGTTTTTTCAGAGACGATATGGATGTCGTGCAATGATGCTGG
AAACAGTGGCGGCTGTACCTGGAATGGTTGGAGGAATGTTGCTACACCTC
AAGTCTCTGCGTAAGTTCCAGCATAGTGGTGGTTGGATCAAAGCTCTGCT
TGAAGAAGCAGAGAATGAGAGGATGCATCTGATGACCATGGTGGGGCTTG
TGAAGCCCAAATGGTATGAGAGGATGCTTGTTCTGACTGTGCAGGGTGTC
TTTTTCAATGCATTCTTTGTGCTTTATCTACTCTCACCTAAACTGGCTCA
TAGAGTTGTTGGCTACTTGGAGGAGGAGGCTATACACTCTTACACTGAAT
ATCTCAAGGATATTGATAGTGGATCTATTGAAAATGTTCCAGCCCCTGCT
ATTGCTATTGACTATTGGAGGTTACCTAAGGATGCTACACTNCAGGATGT
TATTACTGTTATTCGTGCTG
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