CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.261e-27
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS +Y  R  AK+IVA+GLARRC VQV+YAIGV +P+S+ VDT+ TG I D  I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  272 SKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.261e-27
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS +Y  R  AK+IVA+GLARRC VQV+YAIGV +P+S+ VDT+ TG I D  I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  272 SKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.261e-27
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QVSYAIGV  P++V V T  TG IPD++I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVSYAIGVARPINVTVYTEGTGVIPDEKIAALVQEHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SACD2 (S-adenosylmethionine synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ TG I D EI ++V ++FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLASRCEIQVSYAIGVAEPTSISVNTFGTGSIADSEISKLVAQHFDLRPRGIIEMLDLLR---PIYRKTAAYGHFGREEPEFTWE 372
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+GL  +C VQV+YAIGV EP+SV VDT  TGKIP   I +IV+E FD RP  I   LDL R     + KTAAYGHFGRE P+FTWE
Sbjct:  273 SKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTSGTGKIPSARIAQIVREVFDLRPRAIIEQLDLLR---PIYKKTAAYGHFGRELPEFTWE 375
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_DIAST (S-adenosylmethionine synthetase OS=Diaphorobacter sp. (strain TPSY) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV  P+++ V T  TG IPD +I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQIAQLVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 379
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y  R  AK+IVA+GLA++C VQ+SYAIGV  PLS+ VDT+ TGKI D++I  IVK  FD RP  I  +LDL+R     + K AAYGHFGRED D  WE
Sbjct:  279 TKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLDLPWE 381
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  273 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  273 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  273 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIF52.261e-2759.43S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIF22.261e-2759.43S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIAC2.261e-2760.38S-adenosylmethionine synthetase OS=Acidovorax aven... [more]
METK_SACD22.953e-2759.43S-adenosylmethionine synthetase OS=Saccharophagus ... [more]
METK_GEOUR2.953e-2760.38S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_DIAST2.953e-2758.49S-adenosylmethionine synthetase OS=Diaphorobacter ... [more]
METK_CALS82.953e-2759.43S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BORPE2.953e-2757.55S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA2.953e-2757.55S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR2.953e-2757.55S-adenosylmethionine synthetase OS=Bordetella bron... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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