CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ACISJ (S-adenosylmethionine synthetase OS=Acidovorax sp. (strain JS42) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV  P+++ V T  TG IPD +I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQIAQLVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.857e-27
Identity = 66/115 (57.39%), Postives = 78/115 (67.83%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRT--GKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            +KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  PLSVFVD+Y T  G   D+++L I K NFD RPG I  +L L+R     + KTA +GHFGR DPDF WE  K L +
Sbjct:  277 SKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.037e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC+VQVSYAIGV +P SV V+TY TGK+ ++ + ++V ++FD RP  I   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  271 SKVDRSAAYAGRYVAKNIVAAGLASRCLVQVSYAIGVAKPTSVMVETYGTGKVSNEILTQLVLDHFDLRPKGIVKMLDLLR---PIYAKTAAYGHFGRDEPEFTWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.037e-27
Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE---VVKPLK 336
            TKVDRS  Y  R  AK++VA+GLA + ++QV+YAIGV  P+S+ ++T+ T K+ ++++ ++V+E FDFRPG I   LDL R     + KTAAYGHFGR DPDFTWE   +V+ LK
Sbjct:  280 TKVDRSAHYFARYVAKNVVAAGLADKFMIQVAYAIGVARPVSIMINTFGTAKVDEEKLRKVVEEIFDFRPGAIIKKLDLLR---PIYRKTAAYGHFGRNDPDFTWERTDMVRELK 391          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  271 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_NITMU (S-adenosylmethionine synthetase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 58/106 (54.72%), Postives = 80/106 (75.47%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+G+A RC VQ++YAIGV  P+S+ VDT+ TGKIPD +I+++++ +FD RP  I   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  271 SKVDRSAAYAGRYVAKNLVAAGIASRCEVQMAYAIGVARPVSLMVDTFGTGKIPDDKIVKLIERHFDLRPRGIIHGLDLLR---PIYEKTAAYGHFGRDEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_NITEC (S-adenosylmethionine synthetase OS=Nitrosomonas eutropha (strain C91) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLAR+C VQV+YAIGV +P+S+ ++T+ TGK+ D+++  ++  NFD RP  I   L+L R     + KTAAYGHFGRE+P FTWE
Sbjct:  271 SKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMLETFGTGKVSDEKLAELITRNFDLRPRAIIHELNLLR---PIYSKTAAYGHFGREEPSFTWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LEPCP (S-adenosylmethionine synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV  P+++ V T  TG IPD EI ++V+ +FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVEAHFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 64/106 (60.38%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+GL  +C VQV+YAIGV EP+SV VDT  TGKI  K I  IV+E FD RP  I   LDL R     + KTAAYGHFGRE P+FTWE
Sbjct:  273 SKVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTAGTGKISSKRIAEIVREVFDLRPRAIIEQLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 59/106 (55.66%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVASG+AR+C VQ++YAIGV +P+SV VDT+ T  IP+++I  +V ++FD RP  I   L+L+R     + KTAAYGHFGR+D +F+WE
Sbjct:  280 TKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACISJ2.953e-2758.49S-adenosylmethionine synthetase OS=Acidovorax sp. ... [more]
METK_ACACA3.857e-2757.39S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_METFK5.037e-2757.55S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_FERNB5.037e-2752.17S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_RALPJ6.578e-2757.55S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_NITMU6.578e-2754.72S-adenosylmethionine synthetase OS=Nitrosospira mu... [more]
METK_NITEC6.578e-2754.72S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_LEPCP6.578e-2758.49S-adenosylmethionine synthetase OS=Leptothrix chol... [more]
METK_GEOMG6.578e-2760.38S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_CLOCE6.578e-2755.66S-adenosylmethionine synthetase OS=Clostridium cel... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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