CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURP6 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 668) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURP1 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURP0 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1106a) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURMS (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain SAVP1) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURMA (S-adenosylmethionine synthetase OS=Burkholderia mallei GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURM9 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURM7 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10247) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D+ I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y  R  AK+IVASGLA++C VQVSYAIGV  PLS+ VDT+ TGKI D++I  IVK  FD RP  I  +L+L+R     + + AAYGHFGRED D  WE
Sbjct:  279 TKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGREDLDLPWE 381
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURTA6.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_BURPS6.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP66.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP16.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP06.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURMS6.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURMA6.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM96.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM76.578e-2757.55S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_ANATD6.578e-2759.43S-adenosylmethionine synthetase OS=Anaerocellum th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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