CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  Y T +  ++E+L IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGR+   F WEV K LKY
Sbjct:  288 TKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  Y T +  ++E+L IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGR+   F WEV K LKY
Sbjct:  288 TKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  Y T +  ++E+L IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGR+   F WEV K LKY
Sbjct:  288 TKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  Y T +  ++E+L IVK+NFD RPG+I  +LDLK+     + +TAAYGHFGR+   F WEV K LKY
Sbjct:  288 TKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.591e-27
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  271 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLR---PIYGKTAAYGHFGREEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRAP2 (S-adenosylmethionine synthetase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=metK PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.591e-27
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK++VA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKISDSKIEKLVSETFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.591e-27
Identity = 64/113 (56.64%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  Y T +  ++E+L IVK NFD RPG+I  +LDLK+     + +TAAYGHFGR+   F WEV K LKY
Sbjct:  288 TKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKNNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_NEIG2 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.122e-26
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +DT+ TGKI +++++ +V E+FD RP  I   LDL R     + K+AAYGHFGRE+P+FTWE
Sbjct:  273 SKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVCEHFDLRPKGIVQMLDLLR---PIYGKSAAYGHFGREEPEFTWE 375          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_NEIG1 (S-adenosylmethionine synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metK PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.122e-26
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +DT+ TGKI +++++ +V E+FD RP  I   LDL R     + K+AAYGHFGRE+P+FTWE
Sbjct:  273 SKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALVCEHFDLRPKGIVQMLDLLR---PIYGKSAAYGHFGREEPEFTWE 375          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.122e-26
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV  P+++ V T  TG IPD EI ++V  +FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVAAHFDLRPKGIIQMLDLLR---PIYSKTAAYGHFGREEPEFTWE 379          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_PONAB6.578e-2756.64S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE6.578e-2756.64S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA6.578e-2756.64S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN6.578e-2756.64S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_RALSO8.591e-2757.55S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_FRAP28.591e-2756.48S-adenosylmethionine synthetase OS=Francisella phi... [more]
METK2_RAT8.591e-2756.64S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_NEIG21.122e-2656.60S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_NEIG11.122e-2656.60S-adenosylmethionine synthetase OS=Neisseria gonor... [more]
METK_DELAS1.122e-2658.49S-adenosylmethionine synthetase OS=Delftia acidovo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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