CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.122e-26
Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 345
            TKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V ++ T  + + E+L+IV +NFD RPGMI  NLDLKR   + +  TA  GHFG    DF WE  + LK +K
Sbjct:  276 TKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKR---AIYEPTAENGHFGHN--DFPWEQARKLKIDK 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_METPP (S-adenosylmethionine synthetase OS=Methylibium petroleiphilum (strain PM1) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV  P+++ V T  TG IPD ++ R+V E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  277 TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQLARLVAEHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATW (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATT (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATO (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATN (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATM (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATH (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRATF (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_FRAT1 (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRSGAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I ++V E FD R G I  NLDL R     + KT+ YGHFGRE P+FTWE +
Sbjct:  270 SKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_CAEEL1.122e-2655.65Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_METPP1.465e-2657.55S-adenosylmethionine synthetase OS=Methylibium pet... [more]
METK_FRATW1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATT1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATO1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATN1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATM1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATH1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATF1.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRAT11.465e-2657.41S-adenosylmethionine synthetase OS=Francisella tul... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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