CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURVG (S-adenosylmethionine synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURS3 (S-adenosylmethionine synthetase OS=Burkholderia sp. (strain 383) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV +P SV V+T+ TG++ D  I R+V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHFDLRPKGIIQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURCM (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURCJ (S-adenosylmethionine synthetase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURCH (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain HI2424) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURCC (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain MC0-3) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURCA (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain AU 1054) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BURA4 (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain MC40-6) GN=metK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+T+ TG++ D  I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_VEREI (S-adenosylmethionine synthetase OS=Verminephrobacter eiseniae (strain EF01-2) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26
Identity = 60/106 (56.60%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK++VA+GLAR+C +QV+YAIGV EP+++ V T  TG I D+ I  ++K++FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 TKVDRSAAYAARHVAKNVVAAGLARQCQIQVAYAIGVAEPMNITVYTEGTGVIADERIAALIKQHFDLRPRGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURVG1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia vi... [more]
METK_BURS31.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia sp... [more]
METK_BURP81.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_BURCM1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_BURCJ1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCH1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCC1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCA1.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURA41.465e-2657.55S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_VEREI1.914e-2656.60S-adenosylmethionine synthetase OS=Verminephrobact... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top