CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RALME (S-adenosylmethionine synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P++V V T  TGKI D++I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  271 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDEKIAALVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26
Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R  +Q+SYAIGV +P SV V T+ TGKI D++I ++V E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  271 SKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV +P+++ V T  TG IPD +I  +V+E FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 SKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAQPMNITVYTEGTGVIPDAKIAELVREFFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREEPEFTWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RICTY (S-adenosylmethionine synthetase OS=Rickettsia typhi GN=metK PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26
Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TK+DRS AY+ R  AK+IV SGLA RC +Q+SYAIGV  P+SV+ +T+ T K+ +++  +++ E+FD RPG I  NL L       + KTA+YGHFGRED +FTWE
Sbjct:  269 TKIDRSAAYMARYIAKNIVGSGLADRCEIQISYAIGVASPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTASYGHFGREDENFTWE 371          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26
Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P++V V T  TGKI D +I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  271 SKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            TKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +DT+ TGK+P+ +++  V++NFD RP  I   LDLKR     + +TAAYGHFGR D    WE V
Sbjct:  282 TKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEPVSISIDTFGTGKVPESKLVEAVRDNFDLRPAGIIKMLDLKR---PIYKQTAAYGHFGRTDVALPWERV 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_POLNA (S-adenosylmethionine synthetase OS=Polaromonas naphthalenivorans (strain CJ2) GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV +P++V V T  TG IPD+++  +V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  279 SKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAKPMNVTVYTEGTGVIPDEKLSALVQEHFDLRPNGIIQMLDLLR---PIYEKTAAYGHFGRDEPEFTWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +C ++++YAIG+  PLS+F+DT+ TGK+ +++++ +V ++FD RPG I  +LDL++     + K AAYGHFGR D D  WE
Sbjct:  280 TKVDRSAAYAARYVAKNIVAAGLADKCEIELAYAIGIARPLSIFIDTFGTGKVSEEKLVELVNKHFDLRPGAIIRDLDLRK---PLYKKVAAYGHFGRTDIDLPWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26
Identity = 62/113 (54.87%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + TY T    ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WEV K L +
Sbjct:  289 TKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSNKTERELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKLVF 396          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RICPR (S-adenosylmethionine synthetase OS=Rickettsia prowazekii GN=metK PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TK+DRS AY+ R  AK+IV +GLA RC +Q+SYAIGV +P+SV+ +T+ T K+ +++  +++ E+FD RPG I  NL L       + KTA YGHFGRED +FTWE
Sbjct:  269 TKIDRSAAYMARYIAKNIVGAGLADRCEIQISYAIGVADPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTATYGHFGREDENFTWE 371          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RALME1.914e-2658.49S-adenosylmethionine synthetase OS=Ralstonia metal... [more]
METK_HERAR1.914e-2658.49S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_VARPS2.500e-2657.55S-adenosylmethionine synthetase OS=Variovorax para... [more]
METK_RICTY2.500e-2652.83S-adenosylmethionine synthetase OS=Rickettsia typh... [more]
METK_RALEJ2.500e-2658.49S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_STACT3.265e-2654.63S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_POLNA3.265e-2656.60S-adenosylmethionine synthetase OS=Polaromonas nap... [more]
METK_CLOD63.265e-2650.94S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK1_MOUSE3.265e-2654.87S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_RICPR4.264e-2651.89S-adenosylmethionine synthetase OS=Rickettsia prow... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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