CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RICAH (S-adenosylmethionine synthetase OS=Rickettsia akari (strain Hartford) GN=metK PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26
Identity = 54/106 (50.94%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TK+DRS AY+ R  AK++V +GLA RC +Q+SYAIGV  P+SV+ +T+ T K+ +++I +++ ++FD RPG I  +L L+      + KTA+YGHFGRED DFTWE
Sbjct:  269 TKIDRSAAYMARYIAKNVVGAGLADRCEIQISYAIGVAAPVSVYTETFGTSKLSNEQITKLITQHFDMRPGKIIKHLALR---TPCYQKTASYGHFGREDADFTWE 371          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLA +C++Q+SYAIGV +P SV V  + TGKI D++I ++V E+FD RP  I   L+L R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 SKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSAFGTGKIVDEKIAQLVSEHFDLRPKGIVKMLNLLR---PIYKKTAAYGHFGREEPEFSWE 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.264e-26
Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + TY T +  ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WEV K L +
Sbjct:  289 TKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKLVF 396          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 55/106 (51.89%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y+ R  AK++VA+GLA + ++Q+SYAIGV +P+S+ +DTY T K+ + ++L+++ E FDFRPG I   L+L R     + KTAAYGHFGR + +FTWE
Sbjct:  279 TKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 55/106 (51.89%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y+ R  AK++VA+GLA + ++Q+SYAIGV +P+S+ +DTY T K+ + ++L+++ E FDFRPG I   L+L R     + KTAAYGHFGR + +FTWE
Sbjct:  279 TKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 55/106 (51.89%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y+ R  AK++VA+GLA + ++Q+SYAIGV +P+S+ +DTY T K+ + ++L+++ E FDFRPG I   L+L R     + KTAAYGHFGR + +FTWE
Sbjct:  279 TKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R  +Q+SYAIGV +P SV V T+ TGKI D++I ++V E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  271 SKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHFDLRPKGIVQMLDLLR---PIYQKTAAYGHFGREEPEFSWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 59/106 (55.66%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLA +C VQV+YAIGV +P+S+ V+T+ TGKI D +I+ +++ +FD RP  I   LDL R   SR   TAAYGHFGR++P+FTWE
Sbjct:  272 SKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSR---TAAYGHFGRDEPEFTWE 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_RHOFD (S-adenosylmethionine synthetase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metK PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLAR+C +QV+YAIGV +P++V V T  TG IPD +I  +V E FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  277 SKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAKPMNVTVYTEGTGVIPDDKIAELVHELFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK++VA+G+A +  VQV+YAIGV +P+S+ VDT+ TGKI D+EI+ I+ + FD RPG I  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  277 TKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RICAH4.264e-2650.94S-adenosylmethionine synthetase OS=Rickettsia akar... [more]
METK_POLNS4.264e-2654.72S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK1_BOVIN4.264e-2654.87S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_THESQ5.569e-2651.89S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP15.569e-2651.89S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA5.569e-2651.89S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_JANMA5.569e-2657.55S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_AZOSB5.569e-2655.66S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_RHOFD7.273e-2658.49S-adenosylmethionine synthetase OS=Rhodoferax ferr... [more]
METK_CLOPS7.273e-2655.66S-adenosylmethionine synthetase OS=Clostridium per... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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