CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK++VA+G+A +  VQV+YAIGV +P+S+ VDT+ TGKI D+EI+ I+ + FD RPG I  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  277 TKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26
Identity = 54/106 (50.94%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y+ R  AK++VA+GLA + ++Q+SYAIGV +P+S+ +DT+ T K+ ++++L+++ E FDFRPG I   L+L R     + KTAAYGHFGR + +FTWE
Sbjct:  279 TKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSILIDTFGTAKVDEEKLLKVITEIFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS  Y+ R  AK+IVASG+A R +VQ +YAIGVPEPLSV+V+T+ T K+ D+ +  IV +  D  P  I   LDL+R     + KT AYGHFGRE P+FTWE
Sbjct:  280 TKVDRSACYMARYVAKNIVASGIADRALVQFAYAIGVPEPLSVYVNTFGTAKVHDEVLANIVSKELDLTPAGIIKRLDLRR---PIYEKTTAYGHFGRELPEFTWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC VQV+YAIGV  P+S+ ++T+ TG+I D++I+ +V+ +FD RP  I   L+L R     + KTAAYGHFGR++P+FTWE
Sbjct:  272 SKVDRSAAYAGRWVAKNIVAAGLADRCEVQVAYAIGVARPVSMMIETFGTGRITDEKIVELVQRHFDLRPKAIIQELNLLR---PIYGKTAAYGHFGRDEPEFTWE 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VA+GLA RC VQ+SYAIGV EP SV V+T+ TG+I +  ++ +++ +FD RP  +   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  272 SKVDRSAAYAGRYVAKNLVAAGLAERCEVQISYAIGVAEPTSVSVNTFGTGRIAESRLVELIQAHFDLRPVGLLQMLDLIR---PIYRKTAAYGHFGREEPEFTWE 374          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA +C +Q+SYAIGV EP S+ ++T+ TGK+ D  I ++V+E+F+ RP  +   LDLKR     +L TAAYGHFGRE  +FTWE
Sbjct:  271 SKVDRSAAYAGRYVAKNIVAAGLADKCEIQISYAIGVAEPTSISINTFGTGKVSDAVISQLVREHFELRPAGLIKMLDLKR---PIYLPTAAYGHFGREGENFTWE 373          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 63/115 (54.78%), Postives = 79/115 (68.70%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDP----DFTWEVVKPL 333
            +KVDRS AY  R  AKSIVA GLARRC+VQ++YAIGV EPLS+ V+TY TGK  D ++L IVK+NF  RP  I   L+L+R     +  T+ +GHFGR+D      FTWEV K +
Sbjct:  279 SKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRR---PIYYDTSRFGHFGRKDELGTGGFTWEVPKKM 390          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_AMOPR (S-adenosylmethionine synthetase OS=Amoeba proteus GN=metK PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 57/111 (51.35%), Postives = 76/111 (68.47%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPL 333
            +KVDRS AY  R  A+++V + L RR +VQVSY IG PEPL+++V+TY TG   D E+L I+ +NFDFRPG I   LDL      ++++TA +GHFGR  P+F WE  K L
Sbjct:  316 SKVDRSAAYYARYVAQNLVRAKLCRRVLVQVSYVIGKPEPLNIYVNTYGTGTHSDSELLEIINKNFDFRPGFIIEELDLLNPDRIKYVETAYHGHFGR--PEFPWEQEKTL 424          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ALHEH (S-adenosylmethionine synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ TG++  +++ RIV+E+FD RP  I   LDL R     +  TAAYGHFGRED  F WE
Sbjct:  269 SKVDRSAAYACRYVAKNIVAAGLAERCEIQVSYAIGVAEPTSISVETFGTGRVDSEKLTRIVREHFDLRPYGILKMLDLIR---PIYTATAAYGHFGREDEGFPWE 371          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            TKVDRS AY  R  AKS+V +GL RR +VQVSYAIGV EPLS+ + TY T +  ++E+L +V +NFD RPG+I  +LDLK+     + KTA YGHFGR   +F WEV + L +
Sbjct:  288 TKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPRKLVF 395          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOP17.273e-2655.66S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_THENN9.499e-2650.94S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK_BRAHW9.499e-2655.66S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_AZOSE9.499e-2654.72S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_NITOC1.241e-2554.72S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_MARMS1.241e-2554.72S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_LEIIN1.241e-2554.78S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_AMOPR1.241e-2551.35S-adenosylmethionine synthetase OS=Amoeba proteus ... [more]
METK_ALHEH1.241e-2556.60S-adenosylmethionine synthetase OS=Alkalilimnicola... [more]
METK1_HUMAN1.241e-2553.98S-adenosylmethionine synthetase isoform type-1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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