CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA  C VQ++YAIGV +P+S+ +DT+ TGK  +++++ +V+ NFD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  283 TKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQPVSISIDTFGTGKASEEKLIEVVRANFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRHDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 55/106 (51.89%), Postives = 77/106 (72.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRSGAY  R  AK+IVA+GLA +C VQ++YAIGV +P+S+ +DT+ TG++ +  ++ +V+E+FD RP  I   LDL+R     + +TAAYGHFGR D +  WE
Sbjct:  285 TKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAKPVSISIDTFGTGQVSEARLVELVREHFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVELPWE 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ANASK (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain K) GN=metK PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+GLA RC VQV+YAIGV EP+SV VDT+ T K+P+ +I R V+E F   P  I   LDL R     + KTAAYGHFGR +  FTWE
Sbjct:  265 SKVDRSAAYMGRYIAKNVVAAGLASRCEVQVAYAIGVAEPVSVMVDTFGTAKVPEGKIARAVREVFGLTPRAIIEGLDLLR---PVYEKTAAYGHFGRTEKTFTWE 367          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ANADE (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=metK PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+GLA RC VQV+YAIGV EP+SV VDT+ T K+P+ +I R V+E F   P  I   LDL R     + KTAAYGHFGR +  FTWE
Sbjct:  265 SKVDRSAAYMGRYIAKNVVAAGLAARCEVQVAYAIGVAEPVSVMVDTFGTAKVPEGKIARAVREVFGLTPRAIIEGLDLLR---PVYEKTAAYGHFGRTEKTFTWE 367          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ANAD2 (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=metK PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+GLA RC VQV+YAIGV EP+SV VDT+ T K+P+ +I R V+E F   P  I   LDL R     + KTAAYGHFGR +  FTWE
Sbjct:  265 SKVDRSAAYMGRYIAKNVVAAGLASRCEVQVAYAIGVAEPVSVMVDTFGTAKVPEGKIARAVREVFGLTPRAIIEGLDLLR---PVYEKTAAYGHFGRTEKTFTWE 367          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_TREDE (S-adenosylmethionine synthetase OS=Treponema denticola GN=metK PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY+ R  AK++VA+ LARRC VQ++YAIGVP P++V VDT+ TG++P+++I + +KE FD  P  I   LDLKR     + +TAAYGHFGR  P+F+WE
Sbjct:  276 SKVDRSAAYMARYIAKNVVAADLARRCEVQLAYAIGVPFPVAVRVDTFGTGEVPEEKIEKAIKEVFDMSPAGIIKTLDLKR---PIYKETAAYGHFGR--PEFSWE 376          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SYNY3 (S-adenosylmethionine synthetase OS=Synechocystis sp. (strain PCC 6803) GN=metK PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLK-----RGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +C VQVSYAIGV  P+SV +DT+ TGK+ ++++L +V  NF+ RP  I  +L+L+     RGG   +   AAYGHFGR D D  WE
Sbjct:  296 TKVDRSAAYAARYVAKNIVAAGLADKCEVQVSYAIGVARPVSVLIDTFGTGKVDEEKLLEVVLANFELRPAGIIQSLNLRNLPAERGGRF-YQDVAAYGHFGRNDLDLPWE 405          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE---VVKPLK 336
            +KVDR+ +Y+ R  AK+IVA+G+A +  VQV+Y+IGV EP+S+ +DT+ TGKIP   I  IV++ F F+P  +   L L R     F KTA YGHFGR DPDFTWE   +V+P++
Sbjct:  273 SKVDRTASYMARYVAKNIVAAGVADKVEVQVAYSIGVAEPVSLMIDTFGTGKIPSDRIAEIVRKLFSFKPANMIKQLRLLR---PIFKKTACYGHFGRNDPDFTWEKTDMVEPIR 384          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 59/113 (52.21%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 339
            +KVDRS AY  R  AKS+VA+GLARRC+VQ+SYAIGV EPLS+FV+TY T      E++ I+++NFD RPG++  +L L+      +L TA+YGHF   D    WE  K LK+
Sbjct:  275 SKVDRSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEPLSIFVNTYGTSSKTSAELVEIIRKNFDLRPGVLVKSLKLQ---TPFYLSTASYGHF--TDQSKPWEQPKELKF 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRS  Y+ R  AK++VASG A   ++Q+SYAIGV +P+S+ +DT  T K+ +++I ++VKE FDFRP  I  NL+L +     + KTAAYGHFGR+D +F WE +  +K
Sbjct:  285 TKVDRSATYMARYVAKNLVASGAADEVLIQLSYAIGVAQPVSINIDTKGTAKVDEEKIYKVVKEIFDFRPAAIISNLNLLQ---PIYQKTAAYGHFGRKDVEFPWERLDKVK 393          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACP26.157e-2552.83S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_BACHD6.157e-2551.89S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK_ANASK6.157e-2556.60S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_ANADE6.157e-2556.60S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_ANAD26.157e-2556.60S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_TREDE8.041e-2554.72S-adenosylmethionine synthetase OS=Treponema denti... [more]
METK_SYNY38.041e-2553.15S-adenosylmethionine synthetase OS=Synechocystis s... [more]
METK_SYNFM8.041e-2550.43S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_SCHPO8.041e-2552.21S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_PETMO8.041e-2550.00S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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