CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEA8 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRE------DPD----FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D++I+++V+E+FD RP  I   LDL    +  +  TAAYGHFGR       D D    FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEA7 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRE------DPD----FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D++I+++V+E+FD RP  I   LDL    +  +  TAAYGHFGR       D D    FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV EP S+ V+T+ TGK+ D+ ++ +V+E+FD RP  +   LDL +     + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVADELLVALVREHFDLRPYGLIKMLDLIK---PIYRETAAYGHFGRE--QFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRSGAY  R  AK+IVA+GLA++  VQV+YAIGV  P+S+ +DTY T    ++E++  V E FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  283 TKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNELFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRSGAY  R  AK+IVA+GLA++  VQV+YAIGV  P+S+ +DTY T    ++E++  V E FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  283 TKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNELFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LISMC (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRSGAY  R  AK+IVA+GLA++  VQV+YAIGV  P+S+ +DTY T    ++E++  V E FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  283 TKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNELFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LISIN (S-adenosylmethionine synthetase OS=Listeria innocua GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRSGAY  R  AK+IVA+GLA++  VQV+YAIGV  P+S+ +DTY T    ++E++  V E FD RP  I   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  283 TKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNELFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_DEIRA (S-adenosylmethionine synthetase OS=Deinococcus radiodurans GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLARR +V+++YAIG   P+S+ VDTY TG + D+++  ++  +FD RP  I   LDL+R     + +TAAYGHFGR  P+F WE
Sbjct:  294 TKVDRSAAYYARYVAKNIVAAGLARRALVEIAYAIGRAHPVSLRVDTYGTGTVSDEKLDELIAAHFDARPQAIIAQLDLQR---PIYAQTAAYGHFGR--PEFPWE 394          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRS AY  R  AK++VA+G+A +  VQ++YAIG+ +P+S+ V+T+ TGKI D++I+ I+ + FD RP  I   L+L+R     + +TAAYGHFGR D +  WE +  L+
Sbjct:  277 TKVDRSAAYAARWVAKNLVAAGVADKLEVQLAYAIGIAKPVSISVETFGTGKIDDRKIVEIINKVFDLRPSAIIKELNLRR---PIYKQTAAYGHFGRTDVELPWESLNKLE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_YERE8 (S-adenosylmethionine synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  ++ +V+E F+ RP  +   LDL    +  + KTAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTGKIAEDRLVALVREFFELRPYGLIQMLDLL---HPIYRKTAAYGHFGRE--EFPWE 369          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEA87.526e-2350.86S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA77.526e-2350.86S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_MANSM7.526e-2352.83S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_LISMH7.526e-2352.83S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF7.526e-2352.83S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMC7.526e-2352.83S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISIN7.526e-2352.83S-adenosylmethionine synthetase OS=Listeria innocu... [more]
METK_DEIRA7.526e-2351.89S-adenosylmethionine synthetase OS=Deinococcus rad... [more]
METK_CLOTE7.526e-2347.32S-adenosylmethionine synthetase OS=Clostridium tet... [more]
METK_YERE89.830e-2353.77S-adenosylmethionine synthetase OS=Yersinia entero... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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