CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_WOLSU (S-adenosylmethionine synthetase OS=Wolinella succinogenes GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRSGAY  R  AK++VASG+  +  +Q++YAIGV EP+S+ VDT+ TGK+ D ++   V++ F   P  I  +LDL R     + KTA+YGHFGRE P+F+WE
Sbjct:  269 SKVDRSGAYAARYVAKNLVASGVCDKATIQIAYAIGVVEPVSILVDTHGTGKVEDDQLETCVRQLFRLTPKGIIESLDLLR---PIYKKTASYGHFGRELPEFSWE 371          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SYNS3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9311) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKR----GGNSRFLKTAAYGHFGREDPDFTWEVV 324
            TKVDRS AY  R  AK++VA+GLA R  VQ+SYAIGV +P+S+ V+++ +GK+ + E+  +V+E+FD RPG I     L+      G   +  TAAYGHFGR D +  WE V
Sbjct:  287 TKVDRSAAYAARYVAKALVAAGLANRAEVQLSYAIGVAKPVSILVESFGSGKVSNAELTDLVQEHFDLRPGAIIEQFKLREMPSLNGGRFYRDTAAYGHFGRPDLNLPWEDV 398          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SHEAM (S-adenosylmethionine synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++T+ TGK+P+ +++ +V+++FD RP  +   L+L R     +  TAAYGHFGR   +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTGKLPEDKLIALVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +DT+ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR+  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGRK--EFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +DT+ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR+  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGRK--EFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVASGLA RC +Q+SYAIG+ EP+S+ +DT+ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR+  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGRK--EFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BIFA0 (S-adenosylmethionine synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metK PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRT--GKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA +  VQV+YAIGV EP+S+ V+TY T    +  ++I   V++ FD RP  I   LDL R     + KTAAYGHFGRED DFTWE
Sbjct:  287 SKVDRSAAYAARWVAKNIVAAGLAHKVEVQVAYAIGVAEPVSINVETYGTEADGVTREQIQEAVRKVFDLRPAAIVDELDLLR---PIYSKTAAYGHFGREDDDFTWE 391          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.284e-22
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTW 315
            +KVDRS AY  R  AK++VA+GLA RC VQVSYAIGV EP S+ V T+ TGKI D +I ++++++FD RP  I   LDL    +  + +TAAYGHFGR+  +F++
Sbjct:  271 SKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLV---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALDC (S-adenosylmethionine synthetase OS=Salmonella dublin (strain CT_02021853) GN=metK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.284e-22
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVV 324
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE +
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWEKI 371          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEU2 (S-adenosylmethionine synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=metK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.284e-22
Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V++NFD RP  I   LDL    +  +  TAAYGHFGR   +          FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKLSDDKIIKLVRDNFDLRPYAITTMLDLL---HPMYQATAAYGHFGRIPVEMTVGDDTFTAFTWE 382          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_WOLSU9.830e-2350.00S-adenosylmethionine synthetase OS=Wolinella succi... [more]
METK_SYNS39.830e-2348.21S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SHEAM9.830e-2350.94S-adenosylmethionine synthetase OS=Shewanella amaz... [more]
METK_BUCAT9.830e-2350.94S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI9.830e-2350.94S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA59.830e-2350.94S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BIFA09.830e-2354.63S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_STRM51.284e-2252.38S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_SALDC1.284e-2251.85S-adenosylmethionine synthetase OS=Salmonella dubl... [more]
METK_PSEU21.284e-2249.14S-adenosylmethionine synthetase OS=Pseudomonas syr... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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