CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALPA (S-adenosylmethionine synthetase OS=Salmonella paratyphi A GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALNS (S-adenosylmethionine synthetase OS=Salmonella newport (strain SL254) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALEP (S-adenosylmethionine synthetase OS=Salmonella enteritidis PT4 (strain P125109) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALCH (S-adenosylmethionine synthetase OS=Salmonella choleraesuis GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SALA4 (S-adenosylmethionine synthetase OS=Salmonella agona (strain SL483) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGRE  +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSYA2 (S-adenosylmethionine synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD--FTWEVV 324
            +KVDRS AY VR  AK+IVA+G+A RC VQVSYAIGV EP S+ ++T+ T KI + EI+R+++ +FD RP  I   L+L +     + +TA++GHFGR+  +  FTWE +
Sbjct:  270 SKVDRSAAYAVRYVAKNIVAAGIADRCEVQVSYAIGVAEPTSISINTFGTNKISNDEIIRLIRTHFDLRPYGITRMLNLLQ---PMYQQTASFGHFGRQGSETAFTWEKI 376          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEPK (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain KT2440) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V+E FD RP  I   LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIIQLVRECFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEPG (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain GB-1) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V+E FD RP  I   LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIIQLVRECFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PSEP1 (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V+E FD RP  I   LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  270 SKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIIQLVRECFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SALPA1.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALNS1.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella newp... [more]
METK_SALG21.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_SALEP1.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella ente... [more]
METK_SALCH1.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella chol... [more]
METK_SALA41.677e-2252.83S-adenosylmethionine synthetase OS=Salmonella agon... [more]
METK_PSYA21.677e-2250.00S-adenosylmethionine synthetase OS=Psychrobacter a... [more]
METK_PSEPK1.677e-2249.14S-adenosylmethionine synthetase OS=Pseudomonas put... [more]
METK_PSEPG1.677e-2249.14S-adenosylmethionine synthetase OS=Pseudomonas put... [more]
METK_PSEP11.677e-2249.14S-adenosylmethionine synthetase OS=Pseudomonas put... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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