CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T KIP  +++ +V+E FD RP  +   LDL    +  + KTAAYGHFGR   +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTSQLILLVREFFDLRPYGLIQMLDLL---HPIYQKTAAYGHFGR--AEFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS +Y  R  AK+IVA+ LA R  VQ++YAIGV EP+SV VDT+ TG + ++++ + V++ FD RP  I   LDLKR     + +TAAYGHFGR D +  WE
Sbjct:  280 TKVDRSASYAARYIAKNIVAAKLAERVEVQIAYAIGVAEPVSVMVDTFGTGTVSEEKLTQAVRKIFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVELPWE 382          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_MICAN (S-adenosylmethionine synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLK----RGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA +C +QV YAIGV  P+S+FV+T+ TGK+ D  IL ++ + F+ RP  I    +L+      G   +   AAYGHFGR D D  WE
Sbjct:  290 TKVDRSAAYACRYVAKNIVAAGLADKCEIQVGYAIGVARPVSLFVETFGTGKVADDVILDLINKYFELRPAGIIQTFNLRGLPSERGERFYQDVAAYGHFGRNDLDLPWE 399          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LACLA (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. lactis GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS +Y  R  AK+IVA+GLA +  +Q+SYAIGV  P S+ VDT+ TGK+ D E+L  +++ FD RP  I   LDL R     + +TAAYGHFGR D +  WE
Sbjct:  283 TKVDRSASYAARYVAKNIVAAGLAEKAQIQLSYAIGVATPTSINVDTFGTGKVSDDELLAAIRKVFDLRPAGIIQMLDLLR---PIYGQTAAYGHFGRTDVELPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LACCB (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain BL23) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS +Y  R  AK++VA+GLA+R  VQ++YAIGV +P+SV V+T+ T  + +  I + ++ENFD RP  I   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  279 TKVDRSASYAARYIAKNVVAAGLAKRVEVQLAYAIGVAKPVSVSVNTFGTSAVSEDVIEQAIRENFDLRPAGIIKMLDLKR---PIYEQTAAYGHFGRTDVDLPWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LACC3 (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain ATCC 334) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS +Y  R  AK++VA+GLA+R  VQ++YAIGV +P+SV V+T+ T  + +  I + ++ENFD RP  I   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  279 TKVDRSASYAARYIAKNVVAAGLAKRVEVQLAYAIGVAKPVSVSVNTFGTSAVSEDVIEQAIRENFDLRPAGIIKMLDLKR---PIYEQTAAYGHFGRTDVDLPWE 381          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_HYPNA (S-adenosylmethionine synthetase OS=Hyphomonas neptunium (strain ATCC 15444) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR---EDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +PLS++VDT+ TG+  +  I + V+E FD  P  I  +L L    N  +  TAAYGHFGR   E   FTWE
Sbjct:  275 SKVDRSAAYATRYLAKNIVAAGLATRCTIQVSYAIGVAQPLSIYVDTHGTGQADEARIAKAVRELFDLSPKGIRTHLKL---SNPIYGPTAAYGHFGRIPGEGGTFTWE 380          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 57/106 (53.77%), Postives = 70/106 (66.04%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA R  VQV+YAIGV  P+ ++V+T+ T K P ++I R V E FD RP  I   LDL R     + +TAAYGHFGR D D  WE
Sbjct:  284 SKVDRSAAYATRWVAKNIVAAGLADRAEVQVAYAIGVARPVGLYVETFGTEKAPVEDIQRAVAEVFDLRPASILRELDLLR---PIYAQTAAYGHFGRNDLDLPWE 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFT 312
            +KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV EP S+ +DT+ TG I ++ ++ IV+E+FD RP  I   LDL    +  + +TAAYGHFGRE  + T
Sbjct:  269 SKVDRSAAYAGRYVAKNIVAAGLADRCEIQISYAIGVAEPTSISIDTFGTGSISEERLVEIVREHFDLRPYGITKMLDLL---HPMYQQTAAYGHFGREPFEMT 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_XYLFM (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M12) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.190e-22
Identity = 53/105 (50.48%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTW 315
            +KVDRS +Y VR  AK++VA+GLA RC VQVSYAIGV EP+S+ V T+ TGK+PD +I ++++++FD RP  I   LDL    +  +  +A+YGHFGR+  +F +
Sbjct:  271 SKVDRSASYAVRYVAKNVVAAGLADRCEVQVSYAIGVAEPISISVTTFGTGKVPDDKIEKLIRQHFDLRPYGIIKMLDLI---HPIYQPSASYGHFGRKPREFAY 372          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROMH1.677e-2253.77S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PEDPA1.677e-2251.89S-adenosylmethionine synthetase OS=Pediococcus pen... [more]
METK_MICAN1.677e-2249.09S-adenosylmethionine synthetase OS=Microcystis aer... [more]
METK_LACLA1.677e-2251.89S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_LACCB1.677e-2251.89S-adenosylmethionine synthetase OS=Lactobacillus c... [more]
METK_LACC31.677e-2251.89S-adenosylmethionine synthetase OS=Lactobacillus c... [more]
METK_HYPNA1.677e-2253.21S-adenosylmethionine synthetase OS=Hyphomonas nept... [more]
METK_CORU71.677e-2253.77S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_COLP31.677e-2252.88S-adenosylmethionine synthetase OS=Colwellia psych... [more]
METK_XYLFM2.190e-2250.48S-adenosylmethionine synthetase OS=Xylella fastidi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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