CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_KLEP3 (S-adenosylmethionine synthetase OS=Klebsiella pneumoniae (strain 342) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK++VASG+  + IVQV+YAIGV EP+S+ VDT  TGK+ D ++   VK  F   P  I  +LDL R     + KTAAYGHFGRE  +F+WE
Sbjct:  269 SKVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_HAEDU (S-adenosylmethionine synthetase OS=Haemophilus ducreyi GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AKSIVA+GLA RC +Q+SYAIGV +P S+ V+T+ TGK+ +  +++++ +NFD RP  +   LDL +     + +TAAYGHFGRE   F WE
Sbjct:  274 SKVDRSAAYAARYVAKSIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNDTLVKLIYQNFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWE 374
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ESCF3 (S-adenosylmethionine synthetase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOSM (S-adenosylmethionine synthetase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOSE (S-adenosylmethionine synthetase OS=Escherichia coli (strain SE11) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOLU (S-adenosylmethionine synthetase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOLI (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12) GN=metK PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOLC (S-adenosylmethionine synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECOL6 (S-adenosylmethionine synthetase OS=Escherichia coli O6 GN=metK PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_KLEP33.735e-2252.83S-adenosylmethionine synthetase OS=Klebsiella pneu... [more]
METK_HELHP3.735e-2252.83S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_HAEDU3.735e-2250.94S-adenosylmethionine synthetase OS=Haemophilus duc... [more]
METK_ESCF33.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia fer... [more]
METK_ECOSM3.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOSE3.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLU3.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLI3.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLC3.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL63.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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