CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:    5 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 221
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.652e-93
Identity = 172/218 (78.90%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 342.043 bits (876), Expect = 2.158e-93
Identity = 172/218 (78.90%), Postives = 193/218 (88.53%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 3.681e-93
Identity = 171/218 (78.44%), Postives = 194/218 (88.99%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I IIP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFY+AYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+ L+LKEDQ EY+EERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINIIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYTAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTEYMEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.071e-92
Identity = 171/218 (78.44%), Postives = 193/218 (88.53%), Query Frame = 3 
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD   EL I +IP+K ++TLTIVD+GIGMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GRGTK+  +LKEDQ EYLEERRIK++VKKHS+FI YPI L+ EK  +KE+SD
Sbjct:   16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVIPHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSD 232
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.399e-92
Identity = 169/220 (76.82%), Postives = 194/220 (88.18%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M + ETFAF A+I QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E++T+  KL  +PELFIR+IPDKAN TLTI +SGIGMTKADLVNNLGTIARSGTK FMEALQAG D+SMIGQFGVGFYSAYLVA+ V V +KHNDDEQY+WES AGGSFTV +D   EPLGRGT++ L+LKEDQ EYLEERR+KDLVKKHSEFIS+PI L  EKT E+E+++
Sbjct:    1 MENKETFAFNADIQQLMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKLKTKPELFIRLIPDKANNTLTIENSGIGMTKADLVNNLGTIARSGTKAFMEALQAGGDISMIGQFGVGFYSAYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEFISFPIELAVEKTHEREVTE 220
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90A_RAT1.652e-9378.90Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG1.652e-9378.90Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_MACFA1.652e-9378.90Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.652e-9378.90Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE1.652e-9378.90Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN1.652e-9378.90Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_MOUSE2.158e-9378.90Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_CRIGR3.681e-9378.44Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90A_PANTR1.071e-9278.44Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HSP90_EIMTE1.399e-9276.82Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
back to top