CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.464e-49
Identity = 102/218 (46.79%), Postives = 145/218 (66.51%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            E   FQ E+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RF++L+D S      +L +R+  DK ++T+TI D+G+GMT+ D++NNLGTIA+SGT EF   L      D  +IGQFGVGFYSA++VA+ V V T+     D     W SQ  G F +  D+  +   RGT + L+LK+D  E+L+E R++ ++ K+SE +S P+ +W E   E E
Sbjct:    8 EKHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFKALSDNSLYGDDSDLHVRVSVDKDSRTITISDNGVGMTRDDVMNNLGTIAKSGTAEFFGQLSGDEAKDSKLIGQFGVGFYSAFIVADEVTVRTRSALDKDARGVEWRSQGEGDFEIA-DI--DKARRGTDIILHLKDDADEFLDENRLRGIINKYSEHLSIPVQMWKEPVPESE 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.498e-49
Identity = 104/222 (46.85%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF SL++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKCEEKD 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.498e-49
Identity = 102/208 (49.04%), Postives = 152/208 (73.08%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ-----AGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            ET +FQAE+++LL +++++ YS+++IFLRELISN+SDA DK+R+E LT  + L+G     IR+  D    TLTI D+GIGM + +L+ NLGTIARSGT+ F EAL+     A  DVS+IGQFGVGFYSA++VA++V VVT +  + + + W S   GSF+V+ +V G   GRG  +TL+L+ED  ++L+E R++++VK +S+ I+ P+
Sbjct:    4 ETLSFQAEVSKLLDIVVHSLYSDRKIFLRELISNASDACDKLRYEGLTQPALLEGDGAFRIRLSIDAEAGTLTIADNGIGMNRHELIENLGTIARSGTQAFAEALKAKSQAASGDVSLIGQFGVGFYSAFMVADKVEVVTRRAGEAQGWRWSSDGKGSFSVS-EVEG--AGRGAAITLHLREDARDFLDEHRLREIVKTYSDHIAIPV 208          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ENTS8 (Chaperone protein htpG OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=htpG PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.263e-49
Identity = 102/222 (45.95%), Postives = 155/222 (69.82%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKH---NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+     +G  +L +R+  DK  +TLTI D+GIGMT+ +++++LGTIA+SGTK F+E++      D  +IGQFGVGFYSA++VA++V V T+    + DE   WES+  G +TV  D+S     RGT++TL+L+E + E+L + R++ ++ K+S+ I+ P+ + T +  + E
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSSPDLYEGDGDLRVRVSFDKDKRTLTIADNGIGMTRDEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGVSADEAVFWESEGEGEYTVA-DIS--KADRGTEITLHLREGEDEFLNDWRVRSIISKYSDHIALPVEIETREEKDGE 219          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RALEH (Chaperone protein htpG OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.261e-49
Identity = 103/210 (49.05%), Postives = 146/210 (69.52%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKH---NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            A  ET +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE++ + S L+   +L IRI  D   +TLTI D+GIGM++ + ++NLGTIARSGTKEF + L      D ++IGQFGVGFYSA++VA++V V T+      ++   WES   G FT+      E   RGT +TL+L+E + ++L   R+K +++K+S+ IS PI
Sbjct:    3 APHETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPSLLENDADLAIRIEADAKARTLTITDNGIGMSRDEAIHNLGTIARSGTKEFFQQLSGDQQKDAALIGQFGVGFYSAFIVADKVTVETRRAGLGAEDAVRWESTGDGEFTIDAIARNE---RGTTITLHLREGEDDFLSAWRLKGIIQKYSDHISLPI 209          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 100/222 (45.05%), Postives = 158/222 (71.17%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L+      G  +L +R+  DK  +TLTI D+GIGM++ ++++NLGTIA+SGTK F+E++ +    D  +IGQFGVGFYSA++VA++V V T+    N D+   WES   G +T+  D++ +   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ + ++  +E+E
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSTPELYAGDGDLRVRVSTDKEKRTLTISDNGIGMSRDEVIDNLGTIAKSGTKSFLESMGSDQVKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGANADQGVYWESAGEGDYTIA-DITKD--DRGTEITLHLREGEDEFLDDWRVRSVISKYSDHIALPVEIESQTESEEE 219          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_IDILO1.464e-4946.79Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]
HTPG_SHIDS2.498e-4946.85Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_RHORT2.498e-4949.04Chaperone protein htpG OS=Rhodospirillum rubrum (s... [more]
HTPG_ENTS83.263e-4945.95Chaperone protein htpG OS=Enterobacter sakazakii (... [more]
HTPG_RALEH4.261e-4949.05Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_SHISS5.565e-4946.40Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL5.565e-4946.40Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS5.565e-4946.40Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_ERWCT5.565e-4945.05Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_ECOUT5.565e-4946.40Chaperone protein htpG OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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