CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECO57 (Chaperone protein htpG OS=Escherichia coli O157:H7 GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ECO24 (Chaperone protein htpG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 103/222 (46.40%), Postives = 156/222 (70.27%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            M   ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +G  EL +R+  DK  +TLTI D+G+GMT+ +++++LGTIA+SGTK F+E+L      D  +IGQFGVGFYSA++VA++V V T+      +    WES   G +TV  D++ E   RGT++TL+L+E + E+L++ R++ ++ K+S+ I+ P+ +  EK  EK+
Sbjct:    1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--EKREEKD 217
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.268e-49
Identity = 101/228 (44.30%), Postives = 156/228 (68.42%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSF---TVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LTD +  +G  EL +R+  DK   T+TI D+GIGMT+  ++ +LGTIA+SGTKEF   L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSF   T+T++       RGT++ L+L++++ E+ ++ R++ ++ K+S+ IS P+ ++      +E  D
Sbjct:    1 MSQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEANKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHPANEGVLWESEGEGSFNVETITKN------SRGTEIVLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMFEAGKDAQEGED 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.268e-49
Identity = 111/228 (48.68%), Postives = 149/228 (65.35%), Query Frame = 3 
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHND---DEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYL----WTEKTTEKEISD 788
            A  E  AFQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA+DK+RFE + D S L+G  EL IRI  D   +T+TI D+GIGM++ + + NLGTIARSGT+EF   L      D ++IGQFGVGFYSA++VA+RV V ++       E   WES   G FTV      E   RGT +TL+L+E + ++L   R+K +V+K+S+ IS PI +    W E+  E    D
Sbjct:    3 APHEKMAFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAVDKLRFEGIADPSLLEGGGELGIRIGFDAQARTVTIADNGIGMSRDEAIRNLGTIARSGTREFFSQLSGDQQKDAALIGQFGVGFYSAFIVADRVTVESRRAGVPAAEGVRWESAGDGEFTVDAIERAE---RGTTITLHLREGEDDFLSAWRLKSIVQKYSDHISLPIAMRKESWDEEKKEMVAQD 227
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_ECOLI5.565e-4946.40Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC5.565e-4946.40Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL65.565e-4946.40Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL55.565e-4946.40Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK15.565e-4946.40Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS5.565e-4946.40Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]
HTPG_ECO575.565e-4946.40Chaperone protein htpG OS=Escherichia coli O157:H7... [more]
HTPG_ECO245.565e-4946.40Chaperone protein htpG OS=Escherichia coli O139:H2... [more]
HTPG_SHEDO7.268e-4944.30Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_RALSO7.268e-4948.68Chaperone protein htpG OS=Ralstonia solanacearum G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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