CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK    ED L +Y  E +I++LVKK+S+FI++PI +  E+ T
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPEDAEDDLHDYTSEWKIRNLVKKYSDFIAWPIRMDVERRT 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK    ED L +Y  E +I++LVKK+S+FI++PI +  E+ T
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPEDAEDDLHDYTSEWKIRNLVKKYSDFIAWPIRMDVERRT 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK    ED L +Y  E +I++LVKK+S+FI++PI +  E+ T
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPEDAEDDLHDYTSEWKIRNLVKKYSDFIAWPIRMDVERRT 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKE----FMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+L +K       +L I I  DKA +TLT+ D+GIGM + ++V+ +GT+A+SGT E      EA  A A   +IGQFG+GFYS+++VA++V ++T K  +     WES   G++T+    S E   +GT +TL+LK    ED L +Y  E +I++LVKK+S+FI++PI +  E+ T
Sbjct:    3 AHVEQLEFQAEARQLLDLMVHSVYSNKDAFLRELISNASDALDKLRIEALRNKDLEVDTSDLHIEIDADKAARTLTVRDNGIGMAREEVVDLIGTLAKSGTAELRAQLREAKNAAASEELIGQFGIGFYSSFMVADKVQLLTRKAGESAATRWESSGEGTYTIE---SVEDAPQGTSVTLHLKPEDAEDDLHDYTSEWKIRNLVKKYSDFIAWPIRMDVERRT 222          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_WOLTR (Chaperone protein htpG OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.568e-43
Identity = 87/221 (39.37%), Postives = 153/221 (69.23%), Query Frame = 3
Query:  138 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGAD----VSMIGQFGVGFYSAYLVAERVVV-TTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEIS 785
            TE   F AE+ ++L+++I++ Y+NK+IFLREL+SN+SDA DK+R+ES  + + LD   EL I I  +K    L + D+GIGM++ DL+ NLGTIA SGT++F++A++   D    V +IG+FGVGFYS+++VA  V+V + K  ++E ++W S   G +++++  +  P   GTK+TL ++ ++ E+L++ RI+++V  +S+ I++P+    E+   ++++
Sbjct:   12 TENLKFDAEVGKVLNIVIHSLYTNKDIFLRELVSNASDACDKLRYESQLNPNLLDSSGELKITISSNKDENELYVTDNGIGMSRQDLIGNLGTIASSGTQKFLDAIKNSKDSSQAVELIGKFGVGFYSSFMVASEVIVESRKAGEEESWVWRSTGDGEYSISKLDNQIPC--GTKITLVMRPEENEFLDKFRIENIVTTYSDHINFPVEFIDEEGKSEKLN 230          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.568e-43
Identity = 102/221 (46.15%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD---EQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLE----YLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            F+AE+ QLL L+ ++ YSN +IF+REL+SN+SDA DK+RFE+  D S  +   EL IRI  D+  KT+T  D+GIGM +AD + NLGTIA+SGTK F++ L      D  +IGQFGVGFYS ++VA+ + V T+   D       W S   GSFTV      E   RG+ +TL+LKE   E    YL+  +IK LV K+S+ IS PI +  E   E E+ +
Sbjct:   19 FEAEVAQLLHLVTHSLYSNSDIFVRELVSNASDACDKLRFEATNDDSLYEDDGELRIRIAVDEDAKTITFTDNGIGMNEADAIENLGTIAKSGTKAFLDKLSDSQKQDGQLIGQFGVGFYSGFIVADTISVETRKAGDAAENGVRWVSDGTGSFTVENISKTE---RGSSITLHLKEQYSEGEDGYLDRSKIKRLVNKYSDHISLPIQMRKEIWQEDEVEE 236          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.568e-43
Identity = 103/226 (45.58%), Postives = 150/226 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ-------AGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+  +K       +L I+I  DK  +TLTI D+GIGMT+A++V+ +GT+A+SGT E  + L+         A   +IGQFG+GFYS+++VA++V ++T K  + E   WES   G++T+    S E   +GT +TL+LK    ED+L +Y  E +IK LVKK+S+FI++PI +  E+ T
Sbjct:    3 ARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWESSGEGTYTIE---SVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRT 225          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.568e-43
Identity = 103/226 (45.58%), Postives = 150/226 (66.37%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ-------AGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQL-EYLEERRIKDLVKKHSEFISYPIYLWTEKTT 770
            A  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDALDK+R E+  +K       +L I+I  DK  +TLTI D+GIGMT+A++V+ +GT+A+SGT E  + L+         A   +IGQFG+GFYS+++VA++V ++T K  + E   WES   G++T+    S E   +GT +TL+LK    ED+L +Y  E +IK LVKK+S+FI++PI +  E+ T
Sbjct:    3 ARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQLREAKNAQNEAASEELIGQFGIGFYSSFMVADKVELLTRKAGESEATKWESSGEGTYTIE---SVENAPQGTSVTLHLKPEDTEDELHDYTSEFKIKSLVKKYSDFIAWPIRMEVERRT 225          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 99/224 (44.20%), Postives = 147/224 (65.62%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERVVVTTKH---NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            AD +T  FQ E+ QLL L+I++ YSNKEIFLRELISN++DA DK+RFE+L+  S L+  P L IR+  DK   T+TI D+GIGM++ + + +LGTIA+SGT +F++AL      D ++IGQFGVGFYSA++VA+ V V ++       E   W S+  G+F V    + +   RGT++ L+LKE++  + E   ++  +KK+S+ I  PI +  E   ++E  D
Sbjct:    5 ADKQTHGFQTEVKQLLQLMIHSLYSNKEIFLRELISNAADAADKLRFEALSAPSLLEEDPNLRIRVEFDKQAHTITIDDNGIGMSRDEAIAHLGTIAKSGTADFLKALSGDQRKDANLIGQFGVGFYSAFIVADHVDVYSRRAGLTAAEGVHWSSKGEGNFEV---ATIDKPQRGTRVVLHLKENEQHFAEGWTLRSTLKKYSDHIGLPIEMLKEHHGKEEEKD 225          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 101/215 (46.98%), Postives = 147/215 (68.37%), Query Frame = 3
Query:  129 MADT-ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-----QAGAD--VSMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            M++T E   F AE+ +LL L+++  YS++EIFLREL++N++DA D+ RFE+LT+++ L    +  + I PDKA +TLTI D+GIGM+K DL  NLGTIARSGT+ F +AL     + G D   S+IGQFGVGFYSA++VA+RV VT++    +E + W S   GS+T+      +P   GT + L++KED  EYLE  R+  +V+K ++ I+ PI
Sbjct:    1 MSETVERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADATDRRRFEALTNEA-LALPSDARVLIAPDKAARTLTISDAGIGMSKEDLAQNLGTIARSGTRAFSQALGERAAEGGEDQRPSLIGQFGVGFYSAFMVADRVTVTSRRAGSEEAWTWASDGKGSYTLEPASREQP---GTDIVLHMKEDADEYLESYRLDHVVRKWADNIAVPI 211          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_MYCTU1.201e-4345.74Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA1.201e-4345.74Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCBP1.201e-4345.74Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO1.201e-4345.74Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_WOLTR1.568e-4339.37Chaperone protein htpG OS=Wolbachia sp. subsp. Bru... [more]
HTPG_PSYA21.568e-4346.15Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_MYCPA1.568e-4345.58Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA11.568e-4345.58Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_XYLFT2.048e-4344.20Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_METEP2.048e-4346.98Chaperone protein htpG OS=Methylobacterium extorqu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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