CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 101/215 (46.98%), Postives = 147/215 (68.37%), Query Frame = 3
Query:  129 MADT-ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-----QAGAD--VSMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            M++T E   F AE+ +LL L+++  YS++EIFLREL++N++DA D+ RFE+LT+++ L    +  + I PDKA +TLTI D+GIGM+K DL  NLGTIARSGT+ F +AL     + G D   S+IGQFGVGFYSA++VA+RV VT++    +E + W S   GS+T+      +P   GT + L++KED  EYLE  R+  +V+K ++ I+ PI
Sbjct:    1 MSETVERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADATDRRRFEALTNEA-LALPSDARVLIAPDKAARTLTISDAGIGMSKEDLAQNLGTIARSGTRAFSQALGERAAEGGEDQRPSLIGQFGVGFYSAFMVADRVTVTSRRAGSEEAWTWASDGKGSYTLEPASREQP---GTDIVLHMKEDADEYLESYRLDHVVRKWADNIAVPI 211          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBM (Chaperone protein htpG OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 98/219 (44.75%), Postives = 144/219 (65.75%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK-----EDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            ET  F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LT+ S    + + +I+++ DK N+ L I D+GIGMTK +L NNLG IA+SG+ +F +  +      +IGQFGVGFYSA+LV++ V V +K    +E Y W S+    +T+      E    GT++ L +K     E+  E+L+E  +K ++KK+S+FI YPI +   KT  KE
Sbjct:    2 ETKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAMDKIYYKTLTEDSLKFERDDYYIKVVFDKENRVLKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGVGFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIE---PCEKEAYGTEIILKIKDNTEEENYDEFLDEYTLKSIIKKYSDFIRYPIKMDLTKTKPKE 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 100/216 (46.30%), Postives = 149/216 (68.98%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEA-LQAGADVSMIGQFGVGFYSAYLVAERVVV-TTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLK----EDQLE-YLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            F AEI QLL ++I++ YS+KEIFLREL+SN+SDA+DK++F SLT  S L    +  IR+ P+   KTL I+D+GIGMT+ ++V  +GTIARSG K FM+   +      +IGQFGVGFYSA++VA+RV + T K   ++  +WES   G++++  D    P G GT +TL++K    ED+++ + ++  +K LVKK+S+FI++PI +  E  TE+E
Sbjct:    8 FNAEIKQLLDIVIHSLYSHKEIFLRELLSNASDAIDKLKFNSLTHPSLLPENWQPAIRLEPNSETKTLKIIDNGIGMTQEEVVEFIGTIARSGAKAFMQMNAEMKTKPELIGQFGVGFYSAFMVADRVTLHTQKAGSNDGTVWESMGDGTYSL--DSVPRPEGTGTTITLHMKDFKEEDEVQNFTDKWVLKSLVKKYSDFIAHPIKMMGE--TEEE 219          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.048e-43
Identity = 98/215 (45.58%), Postives = 145/215 (67.44%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQ-YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQL-----EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            F+AE  +LL +++N+ YS KEIFLRELISN+SDA+DKI + +L+D S    + + FI++  +K ++TLT+ D+GIGMTK +L +NLGTIA+SG+  F    ++     +IGQFGVGFYSA++VA++V VTTK   +E  Y WES     +T+   ++ E +  GT++ L LKE+       E+LEE R+  ++KK+S+FI YPI +   K   KE
Sbjct:    6 FKAESKRLLEMMVNSIYSQKEIFLRELISNASDAIDKIYYRALSDDSITFNKDDYFIKVTANKEDRTLTVSDTGIGMTKEELESNLGTIAKSGSLAFKTENESKDGHDIIGQFGVGFYSAFMVADKVTVTTKALGEESGYQWESTGADGYTIL-PIAKESV--GTEIRLKLKENSEDESYDEFLEEYRLTSIIKKYSDFIRYPIKMDVTKRELKE 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43
Identity = 96/204 (47.06%), Postives = 137/204 (67.16%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS--MIGQFGVGFYSAYLVAERVVVTTKHNDDEQ--YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYL 752
            FQAE  +LL ++  + YS KE+F+RELISN+SDAL+K+R + + +   L   PE+ I +  D    T+TI D+GIGMTK +LV+NLGTIARSG+K F+EALQ  A+ S  +IGQFGVGFYSA++VA++V V ++    E   Y W S   G F +       P   GTK+ ++LK D  ++  E R++D+V K+S F+S+P+YL
Sbjct:   92 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKRVCEGQVL---PEMEIHLQTDAEKGTITIQDTGIGMTKEELVSNLGTIARSGSKAFLEALQHQAETSSRIIGQFGVGFYSAFMVADKVEVYSRPAAPESPGYQWLSDGSGVFEIAEASGVRP---GTKIIIHLKSDCKDFANESRVQDVVTKYSNFVSFPLYL 289          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43
Identity = 91/206 (44.17%), Postives = 141/206 (68.45%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGA--DVSMIGQFGVGFYSAYLVAERVVVTT-KHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTE 761
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA DK+R+ S ++     G     I +  DK    + I D+GIGM K DL+ NLGTIARSGT  F+++L   +  D  +IGQFGVGFYS+++VA++V VT+ K  +D+ ++WES   G + V+   S +   RGT++ L++K+++  +L+  R+K +VK +S+ I+ PIY + E
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELTSGDSNFKITVKVDKDKGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGEDKVHVWESDGLGEYIVSE--SDKEFTRGTEIVLHIKKEEDTFLDHFRLKHIVKSYSDHIAVPIYFFDE 211          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.675e-43
Identity = 99/218 (45.41%), Postives = 140/218 (64.22%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLK-----EDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            F+AE  +LL ++IN+ YS KE+FLRELISN+SDA+DKI +++LTD S    + + +I+I  DK N+TLTI D+GIGMTK +L  +LGTIA+SG+  F +  +      +IGQFGVGFY+A++VA+ V V TK H  DE + WES     +T+      EP  +   GT + L LK     E+  EYL+  R+K ++K +S+FI YPI +       KE
Sbjct:    6 FKAESKRLLDIMINSIYSQKEVFLRELISNASDAIDKIYYKALTDDSLTFNKDDYYIKISADKENRTLTIADTGIGMTKEELEEHLGTIAKSGSLAFKQENELKDGHDIIGQFGVGFYAAFMVADTVTVITKAHGSDEAHQWESAGADGYTI------EPAAKESAGTDVILKLKENTDDENYDEYLDVHRLKAIIKTYSDFIRYPIKMDVAVNKPKE 217          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.494e-43
Identity = 100/225 (44.44%), Postives = 147/225 (65.33%), Query Frame = 3
Query:  147 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAG--ADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSF-------TVTRDVSGEPLG-RGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            + F+ E+NQLLSLII++ YSNKEIFLREL+SN+SDALDK+++ +L+D++    + E  I I  D    TLT+ D+G+GM + DL NNLGTIARSGTK F++ L A    D ++IGQFGVGFYSA++ A  + V++ K  +++ + W S   G++       T    + G P G  GT + L+L  +  EY    RI++++K +S+ I++PIYL     TEK+  D
Sbjct:    4 YKFETEVNQLLSLIIHSLYSNKEIFLRELVSNASDALDKLKYLTLSDEAYKQIKFEPRIDICFDDTANTLTVRDTGLGMNEEDLKNNLGTIARSGTKAFLDQLAAADKKDSNLIGQFGVGFYSAFMAASTIDVISKKAGENDVWKWTSDGKGAYDLEKVDDTAFPIIDGVPEGANGTCVILHLNNEDSEYATRWRIEEIIKTYSDHIAFPIYL---HFTEKQYDD 225          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43
Identity = 94/212 (44.34%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ---AGADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYL 752
            A  + F ++AE+ QLL LI+++ Y++ EIFLREL+SN++DAL K RF SLTD   +    E  I I  DK      I DSGIGM++ +L+ NLGT+A+SGT  FM++LQ      D ++IGQFGVGFYS ++V E V V T+      E   W+S   G++T+ +    E   RGT+++  LKE+  E+ EE R++ ++KK+S F+ +PIYL
Sbjct:    7 APVQEFEYKAEMKQLLDLIVHSLYTHPEIFLRELVSNAADALSKARFSSLTDGGLMAAAGEDAIHITLDKEKLLFVIEDSGIGMSEDELIANLGTVAKSGTLGFMQSLQEQKKELDGNLIGQFGVGFYSVFMVTENVTVETRSAQEGSEGLRWQSSGQGTYTIEKVEKKE---RGTRISFTLKEEYKEFAEEYRVEQVIKKYSNFVDFPIYL 215          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43
Identity = 101/218 (46.33%), Postives = 142/218 (65.14%), Query Frame = 3
Query:  153 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKH-NDDEQYIWESQAGGSFTVTRDVSGEPLGR---GTKMTLYLKED-----QLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE 779
            F+AE  +LL L+IN+ Y++KEIFLRELISNSSDA+DKI +++LTD+S +  + + +I+I  DK NK L I D GIGMTK +L  NLG IA+SG+  F +  +      +IGQFGVGFYSA++VA+ V V +K    D+ Y WES     +T+      EP  +   GT++ L LKE+       +YLE  R+K ++KK+S+FI YPI +  E +  KE
Sbjct:    6 FKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKALTDESMIFNKEDYYIKITTDKENKMLIISDMGIGMTKEELEENLGVIAQSGSFTFKKENEIKDGFDIIGQFGVGFYSAFMVADSVTVISKALGSDQGYKWESIGAEGYTI------EPYEKESVGTEIILKLKENTEDEKYEDYLEAYRLKTIIKKYSDFIRYPIKMDIETSKPKE 217          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_METC42.048e-4346.98Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_CLOBM2.048e-4344.75Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_BDEBA2.048e-4346.30Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_BACHD2.048e-4345.58Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
TRAP1_RAT2.675e-4347.06Heat shock protein 75 kDa, mitochondrial OS=Rattus... [more]
HTPG_RICFE2.675e-4344.17Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_BACLD2.675e-4345.41Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_TREDE3.494e-4344.44Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_PROVI4.563e-4344.34Chaperone protein htpG OS=Prosthecochloris vibriof... [more]
HTPG_ALKMQ4.563e-4346.33Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
back to top