CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.221e-39
Identity = 86/209 (41.15%), Postives = 138/209 (66.03%), Query Frame = 3
Query:  132 ADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-QAGADVS-MIGQFGVGFYSAYLVAERVVVTTKHNDDEQ--YIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            A  E   F+ E+ +LL +I ++ Y+N+EIFLREL+SN+SDALDK+RF     ++      +L I I  ++  +TLT+ D+GIGMT+ +L++NLGTIA SG++ F++ L + G   S +IG+FGVGFY+ ++VA+ V VTT+   D    + W S   GSF +   +      RGT++ + LKED  ++L++  +KD++++HS FI +P+
Sbjct:    7 AAAEKHEFRTEVRKLLHIITHSLYTNREIFLRELVSNASDALDKLRFAQTRGEAAPAADLDLNIAITVNEETRTLTVSDTGIGMTRQELIDNLGTIASSGSERFLKELAEKGEQASNIIGRFGVGFYAVFMVADSVTVTTRSALDASGAWRWTSDGLGSFELEEALDAPE--RGTRIDIRLKEDAGDFLKKDHLKDVIRRHSNFIPFPV 213          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BUCCC (Chaperone protein htpG OS=Buchnera aphidicola subsp. Cinara cedri GN=htpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.984e-38
Identity = 97/219 (44.29%), Postives = 140/219 (63.93%), Query Frame = 3
Query:  144 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF---IRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQ---AGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYI---WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYL--WTEKT 767
            T  FQ+E+ +LL L+I++ YSNKEIFLRELISN+SDA++KIRFE L    K   +  L+   I+I   K  K + I D+GIGMT  +++ NLGTIA+SGTK F+  +Q          IGQFGVGFYS+++V+  V V T+H  +++ I   W S+  G ++V +    E    GT + L LK  + E+LE  +IK+++KK+S+ IS PI +  + EKT
Sbjct:    8 THTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKY--RENLYTPKIKISIKKDEKKIIISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEKNDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWISEGKGKYSVEKISKEE---HGTIVELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKT 221          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.846e-38
Identity = 83/206 (40.29%), Postives = 132/206 (64.08%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGAD---VSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            E   F+A++ +LL L++++ YS+K +FLRELISN++DA +K+R+E++     L   P   I +  D+ N  L I D+GIGM + +LV +LGTIARSGT+ FME ++A  +     +IGQFGVGFYSA++VA+ V VV+ +   D+ + W S   GS+TV+     +   RGT++TL+L ++   +     ++ +VK+ S  +  PI
Sbjct:    9 EKHVFEADVAKLLHLMVHSVYSDKNVFLRELISNAADACEKLRYEAIVAPELLGSDPASRITLTLDEENARLVIEDNGIGMGRDELVESLGTIARSGTRAFMERIEAAQNKDGAQLIGQFGVGFYSAFMVADNVDVVSRRAGTDKAWHWASDGKGSYTVSAVDLADAPARGTRITLHLMDEAKTFTSRWTVERIVKEQSGHVPVPI 214          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: H90B2_HUMAN (Putative heat shock protein HSP 90-beta 2 OS=Homo sapiens GN=HSP90AB2P PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.056e-36
Identity = 101/219 (46.12%), Postives = 129/219 (58.90%), Query Frame = 3
Query:  135 DTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIAR-SGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTT-------------KHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIY 749
            + ETFAFQAEI QL+SLIINTFYSNKEIFL ELISN+SDALDKIR+ESLTD SKLD   EL I IIP+    TLT+VD+GIGMTKADL+NNLGTIA+     E++E +Q    V    QF     + YL  ER    +             ++ DDE+       G       D SG+   + TK    +KE  ++  E  + K +  +++E I+   Y
Sbjct:   11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNTQEHTLTLVDTGIGMTKADLINNLGTIAKFQDQTEYLEEMQVKEVVEKHSQFLGYPITLYLEKEREKEISDGKAEEEKGEKEEENKDDEEKPKIEDVGSD---EEDDSGKDKKKKTKK---IKEKYIDQEELNKTKPIWTRNTEDITQEEY 223          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.973e-35
Identity = 79/206 (38.35%), Postives = 127/206 (61.65%), Query Frame = 3
Query:  141 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL---QAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            E+  F+A++ +LL +++++ YS+K +FLRELISN +DA +K+R+E++   S L    E  I +  D+ ++ L + D+GIGM + +++  LGTIARSGT+ FME +   +A      IGQFGVGFYS ++VAE V V++ +   +E + W S   GS++V      E   RGT++ L+L ED   Y     ++ +VK+ S  +   I
Sbjct:   10 ESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQLVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSDGKGSYSVEAANLVEAPARGTRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAI 215          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BACTN (Chaperone protein htpG OS=Bacteroides thetaiotaomicron GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.129e-24
Identity = 71/200 (35.50%), Postives = 115/200 (57.50%), Query Frame = 3
Query:  174 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ-PELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEK 764
            +  +I    YS+ EIFLREL+SN+ DA  K+   +L    +  G+  +L I +  +    T+TI D GIG+T  ++   +  IA SG  +F+E  +  A+ ++IG FG+GFYSA++VA++V + TK + D+ Q I W       FT+      +   RG+ + LY+ +D  E+LEE R+ +L+KK+  F+  PI    +K
Sbjct:   13 IFPIIKKFLYSDHEIFLRELVSNAVDATQKLN--TLASIGEFKGELGDLTIHV--ELGKDTITISDRGIGLTAEEIEKYINQIAFSGANDFLEKYKDDAN-AIIGHFGLGFYSAFMVAKKVEIITKSYRDEAQAIKWTCDGSPEFTIEEVDKAD---RGSDIILYIDDDCKEFLEEARVSELLKKYCSFLPVPIAFGKKK 204          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BACFR (Chaperone protein htpG OS=Bacteroides fragilis GN=htpG PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.380e-23
Identity = 72/200 (36.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query:  174 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ-PELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEK 764
            +  +I    YS+ EIFLREL+SN+ DA  K+   +L   S+  G+  +L + +   K   T+TI D GIG+T  ++   +  IA SG  +F+E  +  A+ ++IG FG+GFYSA++V+++V + TK + +  Q + W       FT+      E   RGT + LY+ +D  E+LEE RI  L+KK+  F+  PI    +K
Sbjct:   13 IFPIIKKFLYSDHEIFLRELVSNAVDATQKLN--TLASISEFKGELGDLTVHVSLGK--DTITISDRGIGLTAEEIDKYINQIAFSGANDFLEKYKNDAN-AIIGHFGLGFYSAFMVSKKVEIITKSYKEGAQAVKWTCDGSPEFTLEEV---EKADRGTDIVLYIDDDCKEFLEESRISALLKKYCSFLPVPIAFGKKK 204          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_BACFN (Chaperone protein htpG OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.380e-23
Identity = 72/200 (36.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query:  174 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQ-PELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTK-HNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEK 764
            +  +I    YS+ EIFLREL+SN+ DA  K+   +L   S+  G+  +L + +   K   T+TI D GIG+T  ++   +  IA SG  +F+E  +  A+ ++IG FG+GFYSA++V+++V + TK + +  Q + W       FT+      E   RGT + LY+ +D  E+LEE RI  L+KK+  F+  PI    +K
Sbjct:   13 IFPIIKKFLYSDHEIFLRELVSNAVDATQKLN--TLASISEFKGELGDLTVHVSLGK--DTITISDRGIGLTAEEIDKYINQIAFSGANDFLEKYKNDAN-AIIGHFGLGFYSAFMVSKKVEIITKSYKEGAQAVKWTCDGSPEFTLEEV---EKADRGTDIVLYIDDDCKEFLEESRISALLKKYCSFLPVPIAFGKKK 204          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_PORGI (Chaperone protein htpG OS=Porphyromonas gingivalis GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.803e-23
Identity = 62/196 (31.63%), Postives = 116/196 (59.18%), Query Frame = 3
Query:  168 NQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP-ELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            + +  +I    YS+ EIFLRE++SN+ DA  K++  +LT   +  G+  +L + +  D+  +T+T+ D G+GMT+ ++   +  IA S  +EF+E  +     ++IG FG+GFYSA++V+ERV V+T    +D   + W       +T+      +   RGT + +++ E+  E+L++ +I+ L+ K+ +F++ PI
Sbjct:   12 DNIFPVIKKFLYSDHEIFLREIVSNAVDATQKLK--TLTSVGEFKGETGDLRVTVSVDEVARTITVSDRGVGMTEEEVEKYINQIAFSSAEEFLEKYKDDK-AAIIGHFGLGFYSAFMVSERVDVITRSFREDATAVKWSCDGSPEYTLE---PADKADRGTDIVMHIDEENSEFLKKEKIEGLLGKYCKFLTVPI 201          
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_PORG3 (Chaperone protein htpG OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 61/196 (31.12%), Postives = 116/196 (59.18%), Query Frame = 3
Query:  168 NQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP-ELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERV-VVTTKHNDDEQYI-WESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPI 746
            + +  +I    YS+ +IFLRE++SN+ DA  K++  +LT   +  G+  +L + +  D+  +T+T+ D G+GMT+ ++   +  IA S  +EF+E  +     ++IG FG+GFYSA++V+ERV V+T    +D   + W       +T+      +   RGT + +++ E+  E+L++ +I+ L+ K+ +F++ PI
Sbjct:   12 DNIFPVIKKFLYSDHKIFLREIVSNAVDATQKLK--TLTSVGEFKGETGDLRVTVSVDEVARTITVSDRGVGMTEEEVEKYINQIAFSSAEEFLEKYKDDK-AAIIGHFGLGFYSAFMVSERVDVITRSFREDATAVKWSCDGSPEYTLE---PADKADRGTDIVMHIDEENSEFLKKEKIEGLLGKYCKFLTVPI 201          
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_DESDG5.221e-3941.15Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_BUCCC1.984e-3844.29Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_RHIME9.846e-3840.29Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
H90B2_HUMAN7.056e-3646.12Putative heat shock protein HSP 90-beta 2 OS=Homo ... [more]
HTPG_RHIEC5.973e-3538.35Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_BACTN2.129e-2435.50Chaperone protein htpG OS=Bacteroides thetaiotaomi... [more]
HTPG_BACFR1.380e-2336.00Chaperone protein htpG OS=Bacteroides fragilis GN=... [more]
HTPG_BACFN1.380e-2336.00Chaperone protein htpG OS=Bacteroides fragilis (st... [more]
HTPG_PORGI1.803e-2331.63Chaperone protein htpG OS=Porphyromonas gingivalis... [more]
HTPG_PORG35.245e-2331.12Chaperone protein htpG OS=Porphyromonas gingivalis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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