CK934074

Overview
NameCK934074
Unique NameCK934074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1654 contig Csv1_Contig1654:1..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 104/225 (46.22%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT EF + L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSFTV          RGT++TL+L++++ E+ +E R++ ++ K+S+ IS P+ +W E T E++  D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKA---SRGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTPERDGPD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 104/225 (46.22%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT EF + L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSFTV          RGT++TL+L++++ E+ +E R++ ++ K+S+ IS P+ +W E T E++  D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKA---SRGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTPERDGPD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 104/225 (46.22%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT EF + L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSFTV          RGT++TL+L++++ E+ +E R++ ++ K+S+ IS P+ +W E T E++  D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVDTITKA---SRGTEITLHLRDEEKEFADEWRLRSIITKYSDHISVPVEMWQEGTPERDGPD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 104/225 (46.22%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT EF + L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSFTV          RGT++TL+L++D+ E+ ++ R++ ++ K+S+ IS P+ +W E T E++  D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKANEAVLWESEGEGSFTVETITKAT---RGTEITLHLRDDEKEFADDWRLRSIITKYSDHISIPVEMWQEGTPERDGPD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.173e-52
Identity = 104/221 (47.06%), Postives = 160/221 (72.40%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDD---EQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEK 776
            M+ TET AFQ E+NQLL L+I+  YSNKEIFLREL+SN+SDALDK+RFES+++ +  +G+ EL I++  DK  +T++I+D+GIGMT+ +++ N+GTIA SGTK+F+E +      D  +IGQFGVGFY++++VA++V +TT+   D   E   WES   G +T+    + E   +GT++TL+LKED  E+L++ R+K ++  +S+ I++PI +W  K  E+
Sbjct:    1 MSHTETHAFQTEVNQLLKLMIHALYSNKEIFLRELVSNASDALDKLRFESVSNDALSEGESELAIQVGFDKEARTVSIIDNGIGMTRDEVIANIGTIANSGTKKFLENMTGDQAKDSHLIGQFGVGFYASFIVADKVTLTTRKAGDDKSEGTRWESAGEGEYTLE---TVEKETKGTEITLHLKEDMDEFLDDFRLKSIITTYSDHINFPIKMWQVKLDEE 218
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEFN (Chaperone protein htpG OS=Shewanella frigidimarina (strain NCIMB 400) GN=htpG PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.198e-51
Identity = 102/225 (45.33%), Postives = 155/225 (68.89%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LTD +  +G  +L +R+  +K   T+TI D+GIGMT+  ++ +LGTIA+SGTKEF   L  +A  D  +IGQFGVGFYSA++VA++V V T+   H  +E  +WES+  GSF V      E   RGT++ L+L++++ E+ ++ R++ ++ K+S+ IS P+ +W E T E +  D
Sbjct:    1 MSQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDTLYEGNGDLRVRVSANKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFSNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHAANEGVLWESEGEGSFNVESITKNE---RGTEIVLHLRDEETEFADDYRLRSIITKYSDHISVPVQMWNEGTPESDGPD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51
Identity = 101/225 (44.89%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT +F + L  ++  D  +IGQFGVGFYSA++VA++V V T+   H  DE  +WES+  G+FTV          RGT++TL+L++++ E+ ++ R++ ++ K+S+ IS P+ +W E T E + +D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTITKA---SRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPESDGAD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51
Identity = 101/225 (44.89%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT +F + L  ++  D  +IGQFGVGFYSA++VA++V V T+   H  DE  +WES+  G+FTV          RGT++TL+L++++ E+ ++ R++ ++ K+S+ IS P+ +W E T E + +D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTITKA---SRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPESDGAD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.044e-51
Identity = 101/225 (44.89%), Postives = 157/225 (69.78%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL--QAGADVSMIGQFGVGFYSAYLVAERVVVTTK---HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISD 788
            M+  ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LT+ +  +G  EL +RI  DK   T+TI D+G+GMT+  ++ +LGTIA+SGT +F + L  ++  D  +IGQFGVGFYSA++VA++V V T+   H  DE  +WES+  G+FTV          RGT++TL+L++++ E+ ++ R++ ++ K+S+ IS P+ +W E T E + +D
Sbjct:    1 MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTNDALYEGDGELRVRISADKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTITKA---SRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMWQEGTPESDGAD 222
[Close]
BLAST of CK934074 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.946e-51
Identity = 104/217 (47.93%), Postives = 156/217 (71.89%), Query Frame = 3 
Query:  129 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRIIPDKANKTLTIVDSGIGMTKADLVNNLGTIARSGTKEFMEAL-QAG--ADVSMIGQFGVGFYSAYLVAERVVVTTK--HNDDEQYIWESQAGGSFTVTRDVSGEPLGRGTKMTLYLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEK 764
            M+  ET  FQ EI QLL ++IN+ Y+++EIFLRELISN++DA +K+R+  L+ ++  D +  L IRI PD+  KTLTI D+GIGMTK DL+ N+GTIA SG+K F++ L +AG   DV++IGQFGVGFYSA++VA++V +T++    D + Y WES   GS++++ ++    L RGT +TL+LKED   + +   +K ++K++S F+ YP+Y+  EK
Sbjct:    1 MSQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGDKKDVNLIGQFGVGFYSAFMVADKVSLTSRSYEPDAQGYRWESDGRGSYSISEEMD---LPRGTSITLHLKEDAHSFAQADTVKRIIKQYSSFVPYPVYVGEEK 214
The following BLAST results are available for this feature:
BLAST of CK934074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_SHESR3.153e-5246.22Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESM3.153e-5246.22Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_SHESA3.153e-5246.22Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_SHEON3.153e-5246.22Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_THICR9.173e-5247.06Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_SHEFN1.198e-5145.33Chaperone protein htpG OS=Shewanella frigidimarina... [more]
HTPG_SHEB92.044e-5144.89Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB82.044e-5144.89Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB52.044e-5144.89Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_DESHY5.946e-5147.93Chaperone protein htpG OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934074 ID=CK934074; Name=CK934074; organism=Citrus sinensis; type=EST; length=789bp
GGGGGCCTTTCGCTTTATCAAAATCTCTCTGCGCAAGCCAAAGCAAAAGC
AAAAGCAATTCTCTTCAGTATTCTTGTTTCCAATTTTTTTCTTTTGTTTA
TTCTGTTTCTGTGTTGTGAGGAAGAGCAATGGCGGACACTGAGACATTCG
CATTCCAGGCAGAGATCAACCAGCTGTTGAGTTTGATCATCAATACTTTC
TACAGCAACAAGGAGATTTTCCTTCGTGAACTCATCAGCAACTCCTCTGA
TGCTTTGGACAAGATTCGATTCGAGAGCCTGACGGACAAGAGCAAGCTCG
ATGGACAACCAGAGCTTTTCATCAGAATCATCCCTGACAAGGCTAACAAG
ACGCTCACTATTGTTGATAGCGGTATCGGCATGACCAAAGCAGATTTGGT
AAATAATTTGGGTACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGG
CTTTGCAGGCCGGGGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGT
TTCTATTCGGCTTACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCA
CAATGACGATGAGCAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCA
CTGTTACCAGGGATGTTAGTGGAGAGCCCCTTGGTAGAGGTACCAAGATG
ACTCTGTACCTCAAGGAGGATCAGCTTGAGTACTTGGAGGAGAGGAGAAT
TAAGGACCTTGTGAAGAAGCACTCTGAATTCATCAGCTACCCTATTTACC
TCTGGACTGAGAAGACAACTGAGAAGGAAATTAGCGATG
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