CK934082

Overview
NameCK934082
Unique NameCK934082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 
Query:  386 TCLALGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            T    G+TF   +P    V+A V     ED+DRAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P
Sbjct:   16 TSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 
Query:  386 TCLALGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            T    G+TF   +P    V+A V     ED+DRAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P
Sbjct:   16 TSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ECO27 (Betaine aldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 
Query:  386 TCLALGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            T    G+TF   +P    V+A V     ED+DRAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P
Sbjct:   16 TSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGCQIP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 2 
Query:  386 TCLALGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            T    G+TF   +P    V+A V     ED+DRAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG    + G  +P
Sbjct:   16 TSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPSLEGSQIP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            G+TF V +P    ++A + +    D+D AV  A++   E  W  MT  ERSRI+LRA  L+ +  +ELA LET N GKP  ++   ++      L YYAG A  I G  +P
Sbjct:   21 GETFTVTNPYDGSLLATIGQASQADVDSAVQAAQRGQRE--WAAMTGMERSRILLRAVALLRERNDELAELETRNTGKPISETASVDIVTGADALEYYAGLAPAIEGSQIP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            GKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   21 GKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            GKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   21 GKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            GKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   21 GKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            GKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   21 GKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129
[Close]
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 733
            GKTF   +P   E+IA + +   +DI+ AV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++   ++     +L YYAG A  I G  VP
Sbjct:   21 GKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQG--QKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVP 129
The following BLAST results are available for this feature:
BLAST of CK934082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
BETB_ECO5E3.306e-1436.21Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO573.306e-1436.21Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO273.306e-1436.21Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO243.306e-1436.21Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_CHRSD3.306e-1438.74Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
BETB_ACIBY3.306e-1438.74Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT3.306e-1438.74Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS3.306e-1438.74Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC3.306e-1438.74Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB53.306e-1438.74Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934082 ID=CK934082; Name=CK934082; organism=Citrus sinensis; type=EST; length=769bp
GGGGATGCATGCAGTTGCAAGCTTAACTCGCTAGGACAAAAGTTGCAGAG
AGAGAGAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGC
TATGGCAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTT
CTGCTTCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCA
AGAGGCATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCAT
TCCACCTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTG
TAGACGCAGCATCAGGTAAGATGATTGTTTCCTGATATTTTGGAGCTCAT
TGTTTCTGTTGCTGATAATGAGCCCAATGTTGGAAACTTGTCTGGCCTTA
GGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAA
TGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTC
GCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGG
TCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAACATGGAGGA
GCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATGTACAATCTC
TCAAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTATTATGCTGGA
TGGGCTGATAAAATCCACGGACTAACTGTCCCTGGTGATGGAANNNACCA
TATTCAAACTTTACATGAA
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