CK934091

Overview
NameCK934091
Unique NameCK934091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934091_ssr440 microsatellite CK934091_ssr440:440..454. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13239 contig Csv1_Contig13239:155..979. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.514e-44
Identity = 83/176 (47.16%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  333 STPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFN-CNLLYHDRVKMDPQL---EKETGAKFE---------EDLDTMLPKCDIVVVNTPL 821
            +TPF PAY++  RI +A NL+L +TAGVGSDH+DL       +TV EVTGSNVVSVAE  +  IL+L+RN+  GH Q I+GEW++AGVA   YDLE K + TVG GRIG  +L+RL  FN   LLY+D  ++  +      E    F          E L+ M+ + D+V +N PL
Sbjct:   70 TTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPL 245          

HSP 2 Score: 46.595 bits (109), Expect = 8.514e-44
Identity = 19/65 (29.23%), Postives = 39/65 (60.00%), Query Frame = 2
Query:  143 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKE-GPDCELEKHIPDLHVLI 334
            K++ V Y+G ++A      LGC+E   G+R ++E +G++ + T DK+  P   +++ + D  ++I
Sbjct:    5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVI 69          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17
Identity = 52/160 (32.50%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            +  E  ++A  L+++    VG D+ID+      G+ V    G    + A+     +L   R+ + G     SGEW   GVA+       YD+ GKT+G +G GRIG+ + +R + F+  +LY+ R +  P++EKE  A+F + LD +L + D VV+  PL
Sbjct:   58 IDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTR-KPEVEKELNAEF-KPLDELLRESDFVVLAVPL 215          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.345e-16
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTP 818
            V AE I+ AKNL+++  AGVG D+ID+N     G+ V    G N +S AE  +  +L   R        V  G+W      +   +L GKT G +G GR+G  + +R K    N+L +D   +  +  ++ G K   D DT+L   D++ V+ P
Sbjct:   53 VDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWE--RKKFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF-VSKERAEQIGVKL-VDFDTLLASSDVITVHVP 202          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            +  E  + A  L+++    VG D+ID+      G+ V         + A+     +L   R+ + G   V SGEW   G+A+       Y+L GKT+G VG GRIG+ + +R K FN  +LY+ R +   Q EKE GA++   L+ +L + D V++  PL
Sbjct:   57 IDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKS-QAEKELGAEY-RPLEEVLKESDFVILAVPL 214          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 53/160 (33.12%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            + AE    A  L+++    VG D+ID+      G+ +         + A+   + +L   R  +     V SGEW   GVA+       YD+ G+T+G VG GRIG+ + +R K F   +LY+ R +  P++EKE GA+F   LD +L + D VV+  PL
Sbjct:   57 IDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTR-KPEVEKELGAEF-MPLDELLKESDFVVLVVPL 214          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 51/160 (31.87%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            +  E  + A  L+++    VG D+ID+      G+ V         + A+     +L   R+ + G   V SGEW   GVA+       YD+ GKT+G +G GRIG+ + +R K FN  +LY+ R + + ++E+E  A+F + L+ +L + D VV+  PL
Sbjct:   57 IDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPL 214          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  411 GVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRA---YDLEGKTVGTVGCGRIGKLLLQRLKPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            G G D ID+       + VA V      + A+  +  +L  +RNF  G+ ++I G W  AG A  +   YD EGKTVG +G GRIG+ +L+RLKPF   N +YH+R ++    E+E G ++    +  L + DIV VN PL
Sbjct:   90 GAGYDQIDVEPFKKRHIQVANVPDLVSNATADTHVFLLLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPS--EEEHGCEY-VGFEEFLKRSDIVSVNVPL 227          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            V  E ++ A  L+++    VG D+ID+      G+ V    G    + A+     +L + R  +     V SGEW  + V +       Y L+GKT+G VG GRIG+ L +R K F   ++Y+ R +  P+ E+E GA++  D +T+L + D + ++ PL
Sbjct:   57 VDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTR-KPEAEEEIGAEY-VDFETLLKESDFISLHVPL 214          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPL 821
            + +E    A  L+++    VG D+ID+      G+ V         + A+     +L   R  +   H   SGEW   G+A+       YD+ GKT+G VG GRIG+ + +R + F   +LY+ R +  P+ EKE GA+F   L+ +L + D VV+  PL
Sbjct:   57 IDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSR-KPEAEKELGAEF-RSLEDLLRESDFVVLAVPL 214          
BLAST of CK934091 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 55/159 (34.59%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  357 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAY--RAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEE--DLDTMLPKCDIVVVNTPL 821
            + AE +  A NL+++ T  VG DHID+      G+ V    G    +VAE  +  IL + R  +     + +G+W+     Y     +L+GKT+G VG GRIG    +RL  F+  +LY+D   ++ + + ET     E  DLDT+L K DIV ++ PL
Sbjct:   59 IDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYD---IERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPL 214          
The following BLAST results are available for this feature:
BLAST of CK934091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
FDH1_YEAST8.514e-4447.16Formate dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
GYAR_PYRAB6.037e-1732.50Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
SERA_ARCFU1.345e-1633.12D-3-phosphoglycerate dehydrogenase OS=Archaeoglobu... [more]
GYAR_PYRFU2.996e-1632.50Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEON3.913e-1633.13Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRHO3.913e-1631.88Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
YN14_YEAST1.942e-1538.30Putative 2-hydroxyacid dehydrogenase YNL274C OS=Sa... [more]
GYAR_THELI1.942e-1531.25Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRKO1.942e-1531.88Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEPD3.313e-1534.59Glyoxylate reductase OS=Thermofilum pendens (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_F01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934091 ID=CK934091; Name=CK934091; organism=Citrus sinensis; type=EST; length=823bp
GGGGAGTGTGAGTGACAAATTATATAATTGGGAGATGGCCATGAAGAGAG
TAGCTAGCTCTGCAATTAACGCTTTTGCTTCGTCGGGATATCTTCGTTCA
TCGTCGAGGTTTTCTCGACACTATGCTTCTTCTGGAAGAAAGAAGATTGT
TGGGGTGTTCTACAAGGGCAATGAATACGCTTCAATGAATCCCAACTTTC
TTGGTTGTGTGGAGGGAGGCTGTGGTCTGCGTGAATGGCTGGAATCGAAA
GGTCACCAATATATTGTCACTGATGACAAAGAGGGACCAGACTGTGAACT
AGAGAAACATATTCCTGATCTCCACGTCCTCATCTACCCCCTTCCACCCT
GCCTATGTTACGGCGGAAAGGATTAAGAAGGCCAAAAATTTGCAACTGCT
TCTCACTGCTGGAGTTGGCTCTGATCATATTGATCTAAATGCTGCTGCTG
CTGCTGGTTTAACTGTTGCTGAAGTTACTGGAAGCAATGTGGTTTCAGTT
GCTGAGGACGAGCTTATGAGAATCCTTATTCTTGTCCGTAATTTCTTACC
TGGACACCATCAAGTTATCAGTGGGGAATGGAATGTTGCCGGTGTTGCTT
ATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGTTGTGGA
CGCATTGGCAAGCTGTTGCTCCAACGACTTAAACCTTTCAATTGTAATCT
CCTTTATCATGACCGGGTGAAGATGGATCCTCAATTGGAGAAAGAGACTG
GAGCAAAATTTGAGGAGGATCTAGATACTATGCTTCCCAAATGTGACATA
GTTGTTGTCAACACCCCTCTAAA
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