CK934094

Overview
NameCK934094
Unique NameCK934094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934094_ssr61 microsatellite CK934094_ssr61:61..72. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7277 contig Csv1_Contig7277:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.919e-34
Identity = 80/190 (42.11%), Postives = 113/190 (59.47%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPA---GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF--ANNLSSQLVEQTTFLDDATVKRLK 659
            M+ D CVAD K    P    G PC     VTA+DF F GL  AGNTT+ + + VT A V + P +N +G+S+AR+D A  G+ P HTHP A+EI+ V  G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HFQ NSG   AL   +FNS  PG Q     LF  A  L S  + +   +D   V+ +K
Sbjct:   27 MLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFV-TTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIK 215          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 75/188 (39.89%), Postives = 111/188 (59.04%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGF-ISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN--NLSSQLVEQTTFLDDATVKRLK 659
            ++ DFCV D        G PC     V A DF FSGL +AGNTT+   + VT   VAQ P +N +G+SL R+D A  G+ P HTHP A+EI  V+ G +  GF IS+  N ++ K L KGD+ +FPQGL+HFQ N+G + A+   + +S NPG+     A+F +  ++S  ++ +   +D   + R++
Sbjct:   33 LLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQ 220          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 590
            ++ D CVADL  +    G  C   A VT DDF F GL  AGNT +   + VT A V + P +N LG+S++R+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN +Y KT+  GD+ +FP+GLLHFQ N+G   A    +FNS  PG Q     LFA
Sbjct:   30 LLQDICVADLTSAVKVNGFAC--KAAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFI-TTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFA 188          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.704e-32
Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 3
Query:  102 AMVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + + DFCVAD        G  C  PA +T +DF FSGL +AGNT++   +AVT   VAQ   +N LG+SLAR+D A  G+ P H HP A+EIL ++ G +  GF++S+  N ++ K L KGD+ +FPQGL+HFQ N G    +   + +S NPG+     A+F +   +S  ++ +   ++   V R++
Sbjct:   25 SQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQ 213          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.226e-32
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCV DLK S S  G PC   + V+A DF FSGLG   NT++    AV+PA V  FP +N LGLS+  ++ A GGV P H+HP A+E  +V+ G +  GF++++ NT++ K L  G++ + P+GL+HFQ N G   A    SFNS  PG  +    LF +N  + + ++ +T   DD TV +LK
Sbjct:   33 LQDFCVGDLKASPSINGFPC--KSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTN-NTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLK 215          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.226e-32
Identity = 74/166 (44.58%), Postives = 103/166 (62.05%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS-ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLS 602
            + D CVAD   +    G  C     V A+DF FSGL +AGNTT+   +AVT   VAQ P +N LG+SLAR+D A  G+ P HTHP A+EIL V+ G +  GF++S+  N ++ K + KGD+ +FP+GL+HFQ N G   A+  V+ +S NPG+     A+F +  S
Sbjct:   34 LQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPS 199          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32
Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPA-GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG-LQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 671
            + DFCVA  + +     G  C  P  VTA+DF +SGL +A NTT+ + + VT   V + P +N LG+SLARLD A+GG  P H HP A+EIL+V  G +  GF+SS+   N ++ K LK+GD+ +FP GL+HFQ+N     A+ F  F S NPG ++I D A+F +N  +  +++ +   LD   V+ L  + G
Sbjct:   31 LQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIAD-AVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVFG 223          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.476e-32
Identity = 78/190 (41.05%), Postives = 111/190 (58.42%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPA---GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF--ANNLSSQLVEQTTFLDDATVKRLK 659
            M+ D CVAD K    P    G PC     VTA+DF F GL  AGNT + + + VT A V   P +N +G+S+AR+D A  G+ P HTHP A+EI+ VV G +  GF+ ++AN ++ +T+ KG++ +FP+GL+HFQ N+G   A    + NS  PG Q    ALF  A  L S  + +   +D   V+ +K
Sbjct:   27 MLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFV-TTANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIK 215          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.884e-31
Identity = 76/162 (46.91%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 590
            M+ D CVADL       G PC   A VTADDF F+GL   GNT +   + VT A V  FP VN LG+S+AR+D A GG  P HTHP A+EI+ V+ G +  GFI ++AN ++ KT+  G++ +FP+GL+HFQ N G   A    +FNS   G Q     LFA
Sbjct:   29 MLQDVCVADLASPVKLNGFPC--KANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFI-TTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFA 187          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.482e-31
Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLG--VAGNTTSIINAAVTPAFVAQ---FPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANT-VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 659
            + DFCVAD        G PC  PA VTADDF FSG+G   AG       A+    F A+    P +N LG S AR+D+A GGV P H HP ASE  +V+ G +  GF++S  ++ V  K L++GD+   PQGL+HF  N+G++ A  + S +S NPGL +   AL A  L   LV +T   D+ATV +++
Sbjct:   34 LQDFCVADPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGA-TASRRYGFTARSVDIPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADALLAAPLPVDLVAKTLLTDEATVDKIR 222          
The following BLAST results are available for this feature:
BLAST of CK934094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL32_ORYSJ6.919e-3442.11Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL22_ORYSJ5.857e-3339.89Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL52_ORYSJ9.991e-3345.68Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL21_ORYSJ1.704e-3239.15Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GLT2_ARATH2.226e-3242.47Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL23_ORYSJ2.226e-3244.58Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL16_ARATH4.958e-3241.75Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL13_ORYSJ6.476e-3241.05Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL11_ORYSJ1.884e-3146.91Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ5.482e-3142.63Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934094 ID=CK934094; Name=CK934094; organism=Citrus sinensis; type=EST; length=810bp
GGGGATAGCCATTATCATCAAAATAACTACACTAAATATTAGTCAAAATG
CTTCACATTCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAA
TGCTATGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTC
CCGCCGGCAATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTC
GTATTTTCGGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGC
GGCAGTGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCG
GACTCTCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATG
CACACTCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCAT
AACTGCCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGC
TTAAGAAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAA
GTAAATTCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCC
GAATCCTGGACTCCAAATCACCGATTTCGCTTTATTTGCCAACAACTTGT
CTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAG
AGGCTCAAGGGTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACA
TTCTTCGTTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTAT
TTGATTGTTGGAATTCACGAGTTAGTATTTTCTCTGTTCTCACTTCCCCT
ATCTTTTCTT
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