CK934094

Overview
NameCK934094
Unique NameCK934094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934094_ssr61 microsatellite CK934094_ssr61:61..72. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7277 contig Csv1_Contig7277:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.350e-29
Identity = 74/186 (39.78%), Postives = 108/186 (58.06%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN--NLSSQLVEQTTFLDDATVKRLK 659
            + DFCV DLK S S  G PC   + V+A DF +SGLG   +T++     V PA V  FP +N LG+S+  ++LA GGV P H HP A+E+  V+ G +  GF+S++ NT++ K L  G+  + P+GL+HFQ N G   A    +FNS  PG  +    LF +   + + ++ +    DD TV+ LK
Sbjct:   33 LQDFCVGDLKASASINGFPC--KSAVSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTN-NTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLK 215          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.764e-29
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 3
Query:  108 VNDFCVA--DLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  DLK      G  C  P    A+DF +SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   28 LQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLE 217          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.303e-29
Identity = 70/165 (42.42%), Postives = 98/165 (59.39%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 596
            M+ DFCVADL       G PC  PA VT +DF F GL  A  T  S + +AVT A V + P +N LG+S++R+D A GG+ P H HP ASE + V+ G +  GF++++   +  K + KGD+ +FP+ LLHFQ N     A    +F+S  PG Q+   +LF +N
Sbjct:   26 MLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLI-SKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSN 189          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.008e-29
Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = 3
Query:  108 VNDFCVA--DLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  DLK      G  C  P    A+DF FSGL  AG+T + + + VT   V Q P +N +G+SL R+D A  G  P HTHP A+EIL+++ G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   28 LQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLE 217          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.131e-29
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNP--CVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLV 614
            + DFCV   K +D    N   C  P  V  DDF+F GL +  NT + +  A T    A  P +N LG+S+ARLD A  G+ P HTHP A+E+ +V+ G    GF++S+     N ++ K L KGD+ +FPQGL+HFQ+N G    +G    +S NPG+     A+F     SQL+
Sbjct:   28 LQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGPEHLSQLM 202          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.131e-29
Identity = 74/190 (38.95%), Postives = 111/190 (58.42%), Query Frame = 3
Query:  108 VNDFCVADLKLSD--SPA--GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  +     SPA  G PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL+HFQ N G   A     FNS  PG+     ALF  +  +   ++ ++  +D   +K LK
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLK 228          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.950e-28
Identity = 67/161 (41.61%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG-ADGALGFVSFNSPNPGLQITDFALF 587
            + D CVAD        G  C P + +TA DF F+G+G      + + +AVT A V +   +N LG+SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN ++ KT+KKG++ +FP+GL+H+Q N+  A  A    +FNS  PG Q     LF
Sbjct:   27 LQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFI-TTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLF 186          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.547e-28
Identity = 72/167 (43.11%), Postives = 100/167 (59.88%), Query Frame = 3
Query:  108 VNDFCVADLK-LSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVADL   + S  G+PC P +    DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   29 LQDFCVADLDGKAVSVNGHPCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSN 194          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.344e-28
Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 590
            + D CVAD        G PC     +T  DF F+G+       S + +AVT A V + P +N L +SLAR+D A GG+ P HTHP A+E++ V+ G +  GFI ++AN ++ KT+K G++ +FP+GL+HFQ N+G   A    +FNS  PG       LFA
Sbjct:   28 LQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFI-TTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFA 187          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.673e-28
Identity = 68/168 (40.48%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  102 AMVNDFCVADLKLSDSPA--GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 596
            + + DFCV+    ++     G  C  P +VTADDF FSGL  A   TS + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GF++S+  N ++ K L +GD+ +FP+GL+HFQ N G   A+ F + +S NPG+      +F  N
Sbjct:   28 SQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGAN 195          
The following BLAST results are available for this feature:
BLAST of CK934094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GLT1_ARATH1.350e-2939.78Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL114_ARATH1.764e-2939.47Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL23_ARATH2.303e-2942.42Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL113_ARATH3.008e-2938.95Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GLP1_MESCR5.131e-2940.00Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL37_ORYSJ5.131e-2938.95Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH1.950e-2841.61Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
OXO2_HORVU2.547e-2843.11Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL22_ARATH4.344e-2840.99Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL111_ARATH5.673e-2840.48Germin-like protein subfamily 1 member 11 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934094 ID=CK934094; Name=CK934094; organism=Citrus sinensis; type=EST; length=810bp
GGGGATAGCCATTATCATCAAAATAACTACACTAAATATTAGTCAAAATG
CTTCACATTCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAA
TGCTATGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTC
CCGCCGGCAATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTC
GTATTTTCGGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGC
GGCAGTGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCG
GACTCTCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATG
CACACTCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCAT
AACTGCCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGC
TTAAGAAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAA
GTAAATTCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCC
GAATCCTGGACTCCAAATCACCGATTTCGCTTTATTTGCCAACAACTTGT
CTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAG
AGGCTCAAGGGTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACA
TTCTTCGTTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTAT
TTGATTGTTGGAATTCACGAGTTAGTATTTTCTCTGTTCTCACTTCCCCT
ATCTTTTCTT
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