CK934094

Overview
NameCK934094
Unique NameCK934094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934094_ssr61 microsatellite CK934094_ssr61:61..72. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7277 contig Csv1_Contig7277:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.409e-28
Identity = 71/196 (36.22%), Postives = 113/196 (57.65%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPA-GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILGGTG 680
            + D+CVA    +     G  C  P +VTA+DF +SGL + GNT++ + A+VT   V + P +N LG+++ARLD A GG +P H HP AS+I+LV+ G ++ GF+SS+    T++ K L  GD+  FP GL+ F  N+G   A+      S +PG+     A+F +N  +  +L+ +   LD   V+ ++ +    G
Sbjct:   30 LQDYCVATNGTNRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVFSSEG 225          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.677e-28
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  108 VNDFCVA--DLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLE 216          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.677e-28
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  108 VNDFCVA--DLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLE 216          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27
Identity = 74/190 (38.95%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  108 VNDFCVA--DLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +   ++  ++ Q   LD   VK L+
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLE 216          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.156e-27
Identity = 73/187 (39.04%), Postives = 105/187 (56.15%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            M+ D CVADL       G PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++AN +  K + KG++ +FP+GL+HFQ N+G   A    +FNS  PG Q     LF  +  +   ++ QT  ++   V+++K
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIK 220          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.816e-27
Identity = 68/166 (40.96%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVADL             P     DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF +N
Sbjct:   29 LQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSN 194          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.677e-27
Identity = 73/187 (39.04%), Postives = 105/187 (56.15%), Query Frame = 3
Query:  105 MVNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF--ANNLSSQLVEQTTFLDDATVKRLK 659
            M+ D CVADL       G PC      TA DF    +   G T +   + VT A V Q P +N LG+SLAR+D A GG+ P HTHP ASE++ V+ G +  GFI ++AN +  K + KG++ +FP+GL+HFQ N+G   A    +FNS  PG Q     LF  +  +   ++ QT  ++   V+++K
Sbjct:   37 MLQDVCVADLHSKVKVNGFPC--KTNFTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFI-TTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIK 220          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.677e-27
Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 3
Query:  156 GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 563
            G PC  P  +TA DF  + L  AG+T + + + VT     +FP +N LGLS++R DL + G +P H+HP +SE+L VV G + AGF+ ++ N ++   L+KGD+ +FP+GLLHF ++ G + A  F  +NS NPG+
Sbjct:   41 GYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTN-NKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGV 175          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.677e-27
Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 3
Query:  102 AMVNDFCVADLKLSDSPA--GNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 563
            + + DFCV+    ++     G  C  P +VTADDF F GL  A   TS + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GF++S+  N ++ K L +GD+ +FP+GL+HFQ N G   A+ F + +S NPG+
Sbjct:   28 SQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGV 184          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.272e-27
Identity = 71/194 (36.60%), Postives = 105/194 (54.12%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILGG 674
            + DFCVADL             P     DDF+FS  L  AGNT++   +AVT   VA++P  N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL+HFQ N G   A   VSFNS NPG+      LF ++  + + ++ +   ++   V+ LK    G
Sbjct:    6 LQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAG 199          
The following BLAST results are available for this feature:
BLAST of CK934094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL12_ARATH7.409e-2836.22Putative germin-like protein subfamily 1 member 2 ... [more]
GL117_ARATH9.677e-2838.95Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH9.677e-2838.95Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH1.264e-2738.95Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
NEC1_NICLS2.156e-2739.04Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GER2_WHEAT2.816e-2740.96Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
NEC1_NICPL3.677e-2739.04Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL34_ARATH3.677e-2742.65Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL110_ARATH3.677e-2741.40Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
OXO1_HORVU6.272e-2736.60Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934094 ID=CK934094; Name=CK934094; organism=Citrus sinensis; type=EST; length=810bp
GGGGATAGCCATTATCATCAAAATAACTACACTAAATATTAGTCAAAATG
CTTCACATTCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAA
TGCTATGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTC
CCGCCGGCAATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTC
GTATTTTCGGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGC
GGCAGTGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCG
GACTCTCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATG
CACACTCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCAT
AACTGCCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGC
TTAAGAAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAA
GTAAATTCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCC
GAATCCTGGACTCCAAATCACCGATTTCGCTTTATTTGCCAACAACTTGT
CTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAG
AGGCTCAAGGGTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACA
TTCTTCGTTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTAT
TTGATTGTTGGAATTCACGAGTTAGTATTTTCTCTGTTCTCACTTCCCCT
ATCTTTTCTT
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