CK934094

Overview
NameCK934094
Unique NameCK934094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934094_ssr61 microsatellite CK934094_ssr61:61..72. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7277 contig Csv1_Contig7277:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25
Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVAD        G  C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S  ++ +   ++  T+  L+
Sbjct:   29 LQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQ 216          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25
Identity = 68/188 (36.17%), Postives = 104/188 (55.32%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVAD        G  C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   29 LQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 216          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.001e-24
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVADL       G  C  P   +ADDF  +  L    +T + + + VT   V Q P +N LG+S+ARLD A  G+ P HTHP A+EI  V+ G +  GF++S+  N +  K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   30 LQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSN 195          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 593
            + DFCVAD+       G  C  P  V+++DF  +    +  NT + + + VT   V +FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD+ +FP+ ++HFQ+N   D  A+   + +S NPG+     A+F +
Sbjct:   29 LQDFCVADMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGS 192          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.446e-23
Identity = 62/167 (37.13%), Postives = 96/167 (57.49%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSI--INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN-SGADGALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVADL  +    G  C  P  V+ADDF  + +      T++  + + +T   V + P +N LG+S+ R+D A  G+ P HTHP A+EI  V+ G +  GF++S+  N ++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   29 LQDFCVADLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSN 195          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.446e-23
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVAD        G PC     V  DDF  +  L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D  A+   + +S NPG      A+F +N
Sbjct:   28 LQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSN 197          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 3
Query:  174 PAMVTADDFVFSGLGVAGNTTSIINA---AVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGIL 668
            P  +T D F F+G     NT+S        VT A +A+FPA+NG  +S A L      V P HTHP ++E+LLVV G ++ GFI ++ N +Y + L  GD+ +FP+G++HFQ NSG   A+   +F S  PG+      +F   +   ++ ++   D  T+ +LK  L
Sbjct:   42 PMNITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTT-NKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGTGIDDAVLAKSFKTDVPTILKLKANL 208          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 63/164 (38.41%), Postives = 93/164 (56.71%), Query Frame = 3
Query:  174 PAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 659
            P+ +    F +  L V GN+       VT A  A+FPA+ G  +S A L    G V P H HP ASE+L+VV G +  G + ++ N TVY +TL+ GD+ +FP+G++HFQ N+G D  A  F +F S  PG      ALF + +   +++++   D ATV +LK
Sbjct:   42 PSGIDGAFFTYKNL-VTGNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGSGIDDTILDKSMHTDQATVDQLK 204          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.467e-23
Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 659
            + DFCVAD+       G  C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  N  + K L KGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +   +S  ++ +   ++  T+  L+
Sbjct:   28 LQDFCVADMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQ 215          
BLAST of CK934094 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.467e-23
Identity = 68/170 (40.00%), Postives = 92/170 (54.12%), Query Frame = 3
Query:  108 VNDFCVADLKLSDSPAGNPCVPPAMVTADDFVF-SGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 596
            + DFCVAD        G PC     V  DDF   + L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V  G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D  A+   + +S NPG      A+F +N
Sbjct:   28 LQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSN 197          
The following BLAST results are available for this feature:
BLAST of CK934094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL87_ORYSJ7.667e-2535.64Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ7.667e-2536.17Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ1.001e-2439.76Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ3.805e-2437.20Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ1.446e-2337.13Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL122_ORYSJ1.446e-2340.00Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL92_ORYSJ1.889e-2336.31Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL91_ORYSJ1.889e-2338.41Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
GL811_ORYSJ2.467e-2335.11Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ2.467e-2340.00Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934094 ID=CK934094; Name=CK934094; organism=Citrus sinensis; type=EST; length=810bp
GGGGATAGCCATTATCATCAAAATAACTACACTAAATATTAGTCAAAATG
CTTCACATTCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAA
TGCTATGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTC
CCGCCGGCAATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTC
GTATTTTCGGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGC
GGCAGTGACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCG
GACTCTCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATG
CACACTCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCAT
AACTGCCGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGC
TTAAGAAGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAA
GTAAATTCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCC
GAATCCTGGACTCCAAATCACCGATTTCGCTTTATTTGCCAACAACTTGT
CTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAG
AGGCTCAAGGGTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACA
TTCTTCGTTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTAT
TTGATTGTTGGAATTCACGAGTTAGTATTTTCTCTGTTCTCACTTCCCCT
ATCTTTTCTT
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