CK934095

Overview
NameCK934095
Unique NameCK934095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1449 contig Csv1_Contig1449:83..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: GLRX3_BOVIN (Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1 
Query:  250 AREAVNEVQVVTDSSWENLV-ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 540
            A  A   V+V +   +E L+ + +++ ++V FWAPW   C  +   + ELAKE+  +V+  KL  +  P ++ KY I S+PT LFFKN +K + + GA
Sbjct:    6 AEAAAAVVEVGSSGQFEELLRLRAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQ-QVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGA 102
[Close]
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 37/100 (37.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query:  241 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAK--EYA-GKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 531
            L  A  A + V  +  S+++++V+ S  P LVEF+APWCG C+ +AP  EELA   EYA  KV   K++ D    +  ++G++  PT+ FF +G+ ++ +
Sbjct:   12 LAAAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFF-DGKSEQPV 110
The following BLAST results are available for this feature:
BLAST of CK934095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
GLRX3_BOVIN8.165e-1136.73Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1[more]
ERP38_NEUCR8.165e-1137.00Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934095 ID=CK934095; Name=CK934095; organism=Citrus sinensis; type=EST; length=688bp
GCGGGGACCCAGCAAAAGAAAAAAGAAAGACANNNAAAAATGGCTATGAA
GAATTGTTTTCAAGTTAGCTCAGTGTATAGCACTAGAGCTGGTGTGGTAC
AATGTTACCAACCATTTTCATCTGTAAAGAAGATTCATTTGCCGATTAGT
AACGGGTTGAATAAATCCAATTTCTCATTCACTTCATCATGCTCATCTCT
TTCTCTTCCACTCGGAAGCAGAAGCAGAAACTCCTTGATTCTCTGCAAAG
CTCGGGAAGCTGTCAATGAAGTTCAAGTGGTGACAGATTCAAGTTGGGAA
AACCTTGTGATATCAAGTGAAAACCCTGTGCTTGTGGAGTTTTGGGCACC
TTGGTGCGGACCATGCCGGATGATAGCGCCAGCTATTGAGGAATTAGCCA
AAGAATACGCCGGAAAAGTTGCCTGTTTCAAGCTCAACACCGATGATTCC
CCCAACATTGCAACTAAGTATGGAATTAGAAGCATTCCAACTGTGCTCTT
CTTCAAGAATGGAGAGAAGAAGGAGAGCATCATTGGTGCTGTTCCCAAAT
CTACTTTGTCCTCTACTTTAGATAAATATGTAGAATGAATGGCCAAAAAT
CACATTTACATGTTGTATGAATGACATATTAATCCAAGTTTATGTTTCAT
TTCAAATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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