CK934095

Overview
NameCK934095
Unique NameCK934095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1449 contig Csv1_Contig1449:83..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  271 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 579
            VQ+V+  ++ + + S    VLV+F+A WCGPC+M+ P +E LA E    V   KL+ D SP  A ++G+ SIPT++ FK+G++ E  +G   K +L   + K+
Sbjct:    2 VQIVSQDNFADSIASGL--VLVDFFAEWCGPCKMLTPVLEALAAELP-YVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISKH 101          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  316 SENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 579
            S   ++V+F+A WCGPCRMI+PA E L+ E+ G     K+NTD + +I  +Y I ++PT LFFKN ++ +S+ GA  +S + ST+ K+
Sbjct:   21 SNRLIIVDFFANWCGPCRMISPAFERLSMEF-GNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGA-NESAIISTIRKH 106          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO_CHLTR (Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14
Identity = 39/103 (37.86%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  271 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 579
            VQVV+  ++ + + S    VL++F+A WCGPC+M+ P +E LA E    V   K++ D SP  A +Y + SIPT++ FK+G++ E  +G   K +L   + K+
Sbjct:    2 VQVVSQENFADSIASGL--VLIDFFAEWCGPCKMLTPVLEALAAELP-HVTILKVDIDSSPRPAEQYSVSSIPTLILFKDGKEVERSVGLKDKDSLIKLISKH 101          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: TRXX_ARATH (Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.041e-14
Identity = 35/103 (33.98%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  271 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI--IGAVPKSTLSSTLD 573
            ++ + +S + + V+ S  PVLVEF A WCGPC++I PA+E L++EY  K+   K++ D +P +  ++ +  +P  + FK+G++       GA+ K+ L   +D
Sbjct:   71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYID 173          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO_MYCPN (Thioredoxin OS=Mycoplasma pneumoniae GN=trxA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.041e-14
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  307 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTL 558
            + +S N V+++FWA WCGPC++  P   + A E +  VA  K+N D+  +IA  Y I S+PT++ F+ G++K   IG +PK+ +
Sbjct:   14 LFASNNKVIIDFWAEWCGPCKITGPEFAKAASEVS-TVAFAKVNVDEQTDIAAAYKITSLPTIVLFEKGQEKHRAIGFMPKAKI 96          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO2_DROYA (Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.041e-14
Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  304 LVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 540
            L  +S   V+++F+A WCGPC+MI+P + EL+ +YA  V   K++ D+  +IA +Y I S+PT +F KNG K E   GA
Sbjct:   15 LTKASGKLVVLDFFATWCGPCKMISPKLAELSTQYADTVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGA 93          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 36/103 (34.95%), Postives = 66/103 (64.08%), Query Frame = 1
Query:  271 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 579
            V+VV+  ++ + + +    VL++F+A WCGPC+M+ P +E L  E +  V   K+N DD P  A +YG+ SIPT++ FK+G++ + ++G   K +L   ++++
Sbjct:    2 VKVVSAENFNSFIATGL--VLIDFFAEWCGPCKMLTPVLESLEAEVSS-VLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQH 101          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO2_CAEEL (Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  307 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 573
            VI S  PV+V+F A WCGPC+ + P +EE      G V   K+N D +  +A  YGI ++PTV  FKNGEK     G +    L   ++
Sbjct:   52 VIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHAGELAMDYGISAVPTVFAFKNGEKISGFSGVLDDEQLDDFIE 140          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 35/97 (36.08%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  280 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 570
            +T+ +  + ++S+   V+V+F+A WCGPC+++ P  EE+A++        K++ D +  I+++Y IRSIPTV+FF++G+  +  IG +PK+ L   L
Sbjct:    4 ITNKAELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFV-KVDVDQANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELL 99          
BLAST of CK934095 vs. ExPASy Swiss-Prot
Match: THIO2_DROME (Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  304 LVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPK 549
            L  +S   V+++F+A WCGPC+MI+P + EL+ ++A  V   K++ D+  +IA +Y I S+PT +F KNG K E   GA  K
Sbjct:   23 LTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAK 104          
The following BLAST results are available for this feature:
BLAST of CK934095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
THIO_CHLMU2.076e-1438.83Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV... [more]
NGLY1_CAEBR2.076e-1444.32Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
THIO_CHLTR3.542e-1437.86Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 ... [more]
TRXX_ARATH6.041e-1433.98Thioredoxin-X, chloroplastic OS=Arabidopsis thalia... [more]
THIO_MYCPN6.041e-1439.29Thioredoxin OS=Mycoplasma pneumoniae GN=trxA PE=3 ... [more]
THIO2_DROYA6.041e-1444.30Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 S... [more]
THIO_CHLCV7.890e-1434.95Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 S... [more]
THIO2_CAEEL7.890e-1440.45Probable thioredoxin-2 OS=Caenorhabditis elegans G... [more]
THIO_MYCGA1.346e-1336.08Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE... [more]
THIO2_DROME1.346e-1342.68Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934095 ID=CK934095; Name=CK934095; organism=Citrus sinensis; type=EST; length=688bp
GCGGGGACCCAGCAAAAGAAAAAAGAAAGACANNNAAAAATGGCTATGAA
GAATTGTTTTCAAGTTAGCTCAGTGTATAGCACTAGAGCTGGTGTGGTAC
AATGTTACCAACCATTTTCATCTGTAAAGAAGATTCATTTGCCGATTAGT
AACGGGTTGAATAAATCCAATTTCTCATTCACTTCATCATGCTCATCTCT
TTCTCTTCCACTCGGAAGCAGAAGCAGAAACTCCTTGATTCTCTGCAAAG
CTCGGGAAGCTGTCAATGAAGTTCAAGTGGTGACAGATTCAAGTTGGGAA
AACCTTGTGATATCAAGTGAAAACCCTGTGCTTGTGGAGTTTTGGGCACC
TTGGTGCGGACCATGCCGGATGATAGCGCCAGCTATTGAGGAATTAGCCA
AAGAATACGCCGGAAAAGTTGCCTGTTTCAAGCTCAACACCGATGATTCC
CCCAACATTGCAACTAAGTATGGAATTAGAAGCATTCCAACTGTGCTCTT
CTTCAAGAATGGAGAGAAGAAGGAGAGCATCATTGGTGCTGTTCCCAAAT
CTACTTTGTCCTCTACTTTAGATAAATATGTAGAATGAATGGCCAAAAAT
CACATTTACATGTTGTATGAATGACATATTAATCCAAGTTTATGTTTCAT
TTCAAATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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