CK934097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 49 VRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 V+ ++ DD W F+ TV +RGAAII+AR DHIRDWVLGT G WV+MGV SDGSY +P G++Y PV C NGE+ V+GL ID FSR+++DLT EL EE+A Sbjct: 205 VKAMINDDVWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEERA 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA GE ++ L+ DDAW FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGESLLK-LINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA+V AG K E+V D+ WL +FI TV +RGAAII+AR DH+ WV GT +G W SMG+ SDGSY VP GLI SFPVT ++G + IVQGL I+EFSR ++D + +EL EE+ Sbjct: 195 DIFHASV---AG-KNAAEVVNDEKWLAEDFIPTVAKRGAAIIEARGASSAASAANAAIDHVYTWVNGTADGDWTSMGIPSDGSYGVPEGLISSFPVTTKDGRYEIVQGLEINEFSRARIDASVKELEEER 320
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BURM1 (Malate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=mdh PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 TA GE ++ L+ DD W FI TV +RGAAII+AR DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 200 TAEGESLLK-LINDDEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDATLAELLEER 319
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA + AG K E V D+ WL FI TV +RGAAII+AR DH+ WV GT EG W SMG+ SDGSY VP G+I SFPVT ++G++ IVQGL I+EFSR ++D + +EL+EE+ Sbjct: 195 DIFHAEI---AG-KNAAETVNDEVWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHVHTWVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGKYEIVQGLDINEFSRTRIDASVKELTEER 320
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA V K E+V D AW+ FI TV +RGA II AR D R W+LGTP WVSM V SDGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D TA EL++E+ Sbjct: 195 DLFHAEVKG----KNAAEVVNDQAWIEEYFIPTVAKRGATIIDARGASSAASAASASVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTAAELADER 320
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D+ HA V K E+V D AW+ FI TV +RGAAII AR D R W+LGTP WVSM V SDGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D T EL++E+ Sbjct: 195 DLFHAEVKG----KNAAEVVNDQAWIEEYFIPTVAKRGAAIIDARGASSAASAASATVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTTAELADER 320
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 1 Query: 4 DVNHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 393 D ATV G + + +L+ DDAW FI TV +RGAAII+AR DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY PVT NGE+ V+GL ID FSR++LD T +EL EE+ Sbjct: 197 DYRFATV----GGQSLAKLINDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGVPVTTENGEYKRVEGLEIDAFSRERLDFTLKELLEER 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 TA GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 201 TANGES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CK934097 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 28 TAAGEKPVRELVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 396 TA GE +++ + D AW F+ TV +RGAAII+AR DH+RDW LGT G WV+MGV SDGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 201 TANGES-LKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321 The following BLAST results are available for this feature:
BLAST of CK934097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934097 ID=CK934097; Name=CK934097; organism=Citrus sinensis; type=EST; length=709bpback to top |