CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.587e-20
Identity = 81/238 (34.03%), Postives = 117/238 (49.16%), Query Frame = 3
Query:   78 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            V GG+RGIG A  + LA+    V   SRN     A + E    G  +  S CD+S   + +   + + +   G ++ LVN+A I      L   +ED+ ++ S N        ++A         GSIV I S+ G +G    S+YGA K  +   +K+LA E AK NIR N VAP  I+T M    +E        D + +  P+GR GEP+EV+  V FL    + YITG ++ VD
Sbjct:    7 VFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEI---GAHLALS-CDVSKENEIQCTFKEIKNNL-GNIDYLVNSAGISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKE--------DSLNKMIPLGRFGEPEEVAQSVLFLL--ESPYITGHVLVVD 229          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: GS39_BACSU (General stress protein 39 OS=Bacillus subtilis GN=ydaD PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20
Identity = 83/249 (33.33%), Postives = 122/249 (49.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIE-TVTSIFQGKLNILVNNAAIVFVKPTL-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI-KPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G  AL+TGG  GIG A     A+ GA +    +++ E  +      + +G K      D+   E   + +E TV  +  G L+ILVNNA     K ++ DIT+E +     TNF S F+L++ A    K     +I+  +S+    G P++  Y A KGA+N  T+ +A    KD IR N VAP  I T +I   F E     E +    + TP+GR G+P E       L    +SY+TGQ + V+
Sbjct:   40 LKGKVALITGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLIAGDVGEEEFCNEAVEKTVKEL--GGLDILVNNAGEQHPKESIKDITSEQLHRTFKTNFYSQFYLTKKAIDYLKPGS--AIINTTSINPYVGNPTLIDYTATKGAINAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPE-----ETVAQFGQDTPMGRPGQPVEHVGCYVLLASDESSYMTGQTLHVN 279          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YMFI_BACSU (Uncharacterized oxidoreductase ymfI OS=Bacillus subtilis GN=ymfI PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20
Identity = 82/243 (33.74%), Postives = 118/243 (48.56%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            TAL+TG + GIG +  E LA  G  +           A L E  ++ F V   +   DLS+++  +KL    +SI Q    I++N+    F   T D+    +  +   +  S + L++   P    + +G+IV +SS+ G  G     LY   KGA +   K LA E A   IR N VAP  + T+M+  F   PA  E    IA + PIGR   P E++   AFL    ASYITGQI+ V+
Sbjct:    4 TALITGASGGIGKSISETLAARGYNLLLHYNTNQNAAAELAEKLSQMFGVNAEILQADLSAQDGADKL---TSSIVQPIDAIVLNSGRSHFGLIT-DVDNATVQEMVQLHVASPYMLTRNLLPGMIRNKSGAIVAVSSIWGETGASCEVLYSMAKGAQHSFVKGLAKELAPSGIRVNAVAPGAVDTNMMNQFT--PAEKE---EIADEIPIGRLARPQEIADATAFLLSEKASYITGQILSVN 237          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20
Identity = 80/238 (33.61%), Postives = 116/238 (48.74%), Query Frame = 3
Query:   78 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            V GG+RGIG A  + LA+    V   SR   +L+         G  +  S CD+S   + +   + +T+   G ++ LVN+A I      L   +ED+ ++ S N        +LA         G+IV I S+ G +G    S+YGA K  +   +K+LA E AK NIR N VAP  I T M    EE        D + +  P+GR G+P+EV+  V FL    + YITG ++ VD
Sbjct:    7 VFGGSRGIGKAVSKLLAQRDYKVAVISR---DLEVAKAAAAEVGAHLALS-CDVSKENEIQDTFKEITNNL-GNVDYLVNSAGIRRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEE--------DSLTKMVPLGRFGDPEEVAQSVLFLL--ESPYITGHVLVVD 229          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20
Identity = 84/264 (31.82%), Postives = 118/264 (44.70%), Query Frame = 3
Query:    3 GKTSMGEQELISRSKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG-PAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            G+ + G    +SRS          LVTGG RGIG A    LA  G  V           A  H        + G  CD++     ++  + V    QG + +LV NA I      + +T E    V +TN    F  +Q A    +    G I+FI SV G+ GI + + Y A K  +  + ++++ E AK  +  N VAP  I T M +  +E   AG+  LD I    P  R G  +EV+  V+FL    ASYI G +I VD
Sbjct:   12 GEATAGRPAFVSRS---------VLVTGGNRGIGLAIARRLAADGHKV-----------AVTHRGSGAPDDLFGVQCDVTDSAAVDRAFKEVEE-HQGPVEVLVANAGISKDAFLMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRALDERIQAGA--LDFI----PAKRVGTAEEVAGAVSFLASEDASYIAGAVIPVD 248          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: PHBB_RALEH (Acetoacetyl-CoA reductase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.030e-20
Identity = 73/235 (31.06%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 773
            A VTGG  GIG A  + LA+ G  +V  C  N    +  L + K  GF    S  +++  +  +   + V S   G++++L+NNA I        +T  D   V  TN  S+F++++         G G IV ISSV G +G    + Y   K  ++  T  LA E A   +  NTV+P  I T M+K   +     + LD I    P+ R G P+E++S+ A+L    + + TG
Sbjct:    6 AYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEV-GEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQ-----DVLDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTG 234          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DECR2_DANRE (Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.030e-20
Identity = 78/256 (30.47%), Postives = 116/256 (45.31%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR--EKLIETVTSIFQ--GKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQT-------PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L+   A +TGG  GIG    E L R G      SRN      ++ +   K    TG  C   + + R  E ++  V    +  G+++IL+NNAA  F+ P   ++     TV   +    F+ S++ +  +     GSIV IS+  G RG       G+ K A + +T++LA EW    +R NTVAP  I          G  G   L G   +T       P+ RAG   E++  V FL   A+SY+TG ++  D
Sbjct:   33 LSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNL----EKISQAAKKLTSTTGRRCLPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTFNTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEWGPSGVRVNTVAPGPI---------SGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLFLASRASSYVTGSVLVAD 275          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: RHLG_PSEAE (Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=rhlG PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 76/255 (29.80%), Postives = 118/255 (46.27%), Query Frame = 3
Query:   51 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS----IVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +SL G  ALVTGG+RGIG    + L   GA V  C+R+     +   RL  + +          DLSS     +L + +  +   +L+ILVNNA   +              V   N  SVF   Q   PL + S +      ++ I SV G+  +      YG  K A++QL++ LA E   ++I  N +AP    + M +     P   + L+  +   P+GR G P+E+++L   L   A +Y+TG +I +D
Sbjct:    5 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD----CQAIPADLSSEAGARRLAQALGEL-SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDP---QALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPID 251          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: PHBB_CHRVI (Acetoacetyl-CoA reductase OS=Chromatium vinosum GN=phbB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 74/239 (30.96%), Postives = 115/239 (48.12%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 773
            ALVTGG  GIG +    LA+ G  +V  C  ++    A   EWK     +GF +     D+SS +   +++  +T    G ++ILVN A I   K    +       V + N  SVF++++         G G I+ ISSV G RG    + Y A K  M+  T  LA E A   +  NT++P  ++T+M     +    S  + GI    P+ R  +P+E+++ +AFL    + Y+TG
Sbjct:    5 ALVTGGIGGIGTSICTRLAKDGCTVVANCHPSEA---AAAEEWKQARAAEGFDIAVFTADVSSFDDSARMVREITEQV-GPIDILVNCAGITRDKTFKKMEQAHWEAVINVNLNSVFNVTRQVWDGMLERGFGRIINISSVNGQRGQFGQANYSAAKAGMHGFTMALAQEGASKGVTVNTISPGYVETAMTLAMNDDVRNS-IISGI----PMRRMAQPNEIAAAIAFLAGDESGYMTG 234          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19
Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G  ALV+GG RG+G + V  +   GA V        E  A   E  +    V     D++   Q    ++T  + F G L++LVNNA I+ +    D    +   +   N   VF   +      K +G GSI+ ISS+ G+ G  +   Y A K A+  LTK+ A E     IR N++ P ++KT M          ++++     QT +GRA EP EVS+LV +L    +SY TG    VD
Sbjct:    5 LIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVH---LDVTQPAQWTAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM----------TDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVD 235          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
CBR4_XENLA1.587e-2034.03Carbonyl reductase family member 4 OS=Xenopus laev... [more]
GS39_BACSU2.072e-2033.33General stress protein 39 OS=Bacillus subtilis GN=... [more]
YMFI_BACSU2.707e-2033.74Uncharacterized oxidoreductase ymfI OS=Bacillus su... [more]
CBR4_XENTR2.707e-2033.61Carbonyl reductase family member 4 OS=Xenopus trop... [more]
FABG_MYCS24.617e-2031.823-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
PHBB_RALEH6.030e-2031.06Acetoacetyl-CoA reductase OS=Ralstonia eutropha (s... [more]
DECR2_DANRE6.030e-2030.47Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rer... [more]
RHLG_PSEAE7.875e-2029.80Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-... [more]
PHBB_CHRVI7.875e-2030.96Acetoacetyl-CoA reductase OS=Chromatium vinosum GN... [more]
HSD_MYCTU1.029e-1932.243-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
back to top