CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YGFF_ECOLI (Uncharacterized oxidoreductase ygfF OS=Escherichia coli (strain K12) GN=ygfF PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.309e-18
Identity = 83/248 (33.47%), Postives = 119/248 (47.98%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK--LNILVNNAAIVFVKPTLD-ITAEDMSTVSSTNFESVFHLSQLA---HPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 782
            ALVTGG+RGIG AT   LA+ G  V    +  +    E+   + +   K F +   + D        +++   T+I Q    L  LVNNA I+F + T++ +TAE ++ V STN    F   + A     L      G+IV +SSV    G P   + Y A KGA++ LT  L+ E A   IR N V P  I T M      G  G   +D +    P+ R G+ +EV+  + +L    ASY+TG  I
Sbjct:    4 ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISD------ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA--SGGEPGR--VDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFI 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 73/245 (29.80%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEW-KNKGFK---VTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            ALVTG   GIG     +L   G  I+ T    +   + R  +W +++GF+   V   + DL++ E     I+   +  +G++++LVNNA I        ++ E  S V  TN +++F ++Q          +G IV ISSV G++G    + Y A K  +   TK LA E A+ NI  N VAP    T M+    E     + +  I  Q P+ R   P E+++ V +L     +Y+TG+ + ++
Sbjct:    7 ALVTGALGGIGSEICRQLVTAGYKIIATVVPRE---EDREKQWLQSEGFQDSDVRFVLTDLNNHEAATAAIQEAIAA-EGRVDVLVNNAGITRDATFKKMSYEQWSQVIDTNLKTLFTVTQPVFNKMLEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAPGYTATPMVTAMRE-----DVIKSIEAQIPLQRLAAPAEIAAAVMYLVSEHGAYVTGETLSIN 242          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 78/246 (31.71%), Postives = 107/246 (43.50%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAG-EPDEVSSLVAFLCLPAASYITGQIICVD 791
            L+G T ++TGG RG+G     +    GA V        E  A   E    G        D++  E  ++++      F G ++ LVNNA I         + E    V   N   VF   +   P  K +G GSIV ISS  G+ G+   S YGA K  +  L+K  A E   D IR N+V P +  T M         G    +G    TP+GR G EP E++  V  L    +SY+TG  + VD
Sbjct:    4 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD 240          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 82/245 (33.47%), Postives = 116/245 (47.35%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFH-LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            T L+TG +RGIG A    LA+  F  +VH  SR + E +A     +  G        D+S R E  +KL   V +   G    +V NA +        +T ED   V  TN +  ++ L  +  P+ +    G IV I+SV G+ G      Y A K  +    K LA E AK  I  N VAP +I T ++   E  P     +D I +  P GR G+P+EV+  V FL    A+Y+T Q+I V+
Sbjct:    4 TILITGSSRGIGKAIALRLAQAGFDIVVHCRSRIE-EAEAVAQAVRELGQNARVLQFDVSCRSEAADKLTADVEA--HGAYYGVVLNAGLTRDNAFPALTDEDWDRVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDILD--ENVP-----IDEILKMIPAGRMGDPEEVAHAVNFLMGEKAAYVTRQVIAVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 71/251 (28.29%), Postives = 121/251 (48.21%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L     ++TGG+ G+G A      RFG      +++  +  +  LDA+  E +  G +      D++  E    L++T    F G L++++NNA +    P+ +++ ++ + V  TN    F  S+ A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N + P  + T +     E  A  E    +    P+G  G+P+EV+++ AFL    ASY+TG  +  D
Sbjct:    5 LKDKVVVITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINA---EKFADPEQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 247          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB8_MOUSE (Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 75/248 (30.24%), Postives = 112/248 (45.16%), Query Frame = 3
Query:   57 LNGMTALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-------KVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 773
            L    ALVTGG   GIG A    LA  GA V  C  +       +    + G        K      D+S      +L+E V + F    +++V+ A I   +  L ++ ED   V + N +  F ++Q A   L  + G GSI+ ISS+ G  G    + Y + K  +  LT+  A E  +  IR N+V P  I T M +   E     +  D +    P+G  G+P++V+ +VAFL    + YITG
Sbjct:    7 LRSALALVTGGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGSPGSEDGAPRGKHAAFQADVSQGPAARRLLEEVQACFSRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIIGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPE-----KVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITG 249          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.321e-18
Identity = 73/247 (29.55%), Postives = 111/247 (44.94%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-------TGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 773
            L    ALVTG   GIG A    LA  GA V  C  ++      +      G K             D+S       L+E V + F    +++V+ A I   +  L ++ +D   V + N +  F ++Q A     ++G  GSI+ ISS+ G  G    + Y A K  +  LT+  A E  +  IR N+V P  I T M +   +     + +D I    P+G  G+P++V+ +VAFL    + YITG
Sbjct:    9 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-----KVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITG 250          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18
Identity = 76/266 (28.57%), Postives = 119/266 (44.74%), Query Frame = 3
Query:    9 TSMGEQELISRSKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHT----CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQIICVD 791
            T+  E+E + +     +     +VTG +RGIG A    L + G  V       ++   E+  ++ E+  +     G   D+S     + +++T    + G ++++VNNA    +   + +       V   N   VF  SQ A  +      G I+ I+SV G+ G    + Y A K  +   +K  A E A  NI  N V P  I + M         G +    I    P+GR G+P++V+ LV FL L PAASYITGQ   +D
Sbjct:    1 TTTEEEEAVPK-----VESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGG---DVSKEADVDAMMKTAVDKW-GTIDVVVNNAGDTLL---IRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-----GEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTID 249          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18
Identity = 71/256 (27.73%), Postives = 122/256 (47.66%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIAR-----QTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L     ++TGG+ G+G A      RFG      +++  +  +  LDA+  E +  G +      D++  E    L++T    F G L++++NNA +    P+ +++ ++ + V  TN    F  S+ A   F  +   G+++ +SSV  +   P    Y A KG M  +T+ LA E+A   IR N + P  + T +           +F D + R       P+G  G+P+EV+++ AFL    ASY+TG  +  D
Sbjct:    5 LKDKVVVITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI--------NAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFAD 247          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DECR_MOUSE (2,4-dienoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Decr1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18
Identity = 71/252 (28.17%), Postives = 115/252 (45.63%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLS-QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT----SMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +  G  A +TGG  G+G A    L+  GA     SRN   L A   E  +K G KV    CD+   +     +  +  +  G  ++++NNAA  F+ P+  +T     T++        +++ ++   L KA    + + I+++    G   V    + K  +  + K+LA EW +  +R N + P  IKT    S + P   G    E +D I    P GR G  +E+++L  FLC   AS+I G +I  D
Sbjct:   56 AFQGKVAFITGGGTGLGKAMTTFLSTLGAQCVIASRNIDVLKATAEEISSKTGNKVHAIRCDVRDPDMVHNTVLELIKV-AGHPDVVINNAAGNFISPSERLTPNGWKTITDIVLNGTAYVTLEIGKQLIKAQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEWGRYGMRFNIIQPGPIKTKGAFSRLDP--TGRFEKEMIDRI----PCGRLGTMEELANLATFLCSDYASWINGAVIRFD 300          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
YGFF_ECOLI3.309e-1833.47Uncharacterized oxidoreductase ygfF OS=Escherichia... [more]
PHAB_ACISR4.321e-1829.80Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
HSD_STREX4.321e-1831.713-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_AGGAC4.321e-1833.473-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
DHGA_BACME4.321e-1828.29Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHB8_MOUSE4.321e-1830.24Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus ... [more]
DHB8_HUMAN4.321e-1829.55Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
FABG4_BRANA5.644e-1828.573-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
DHG4_BACME5.644e-1827.73Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]
DECR_MOUSE5.644e-1828.172,4-dienoyl-CoA reductase, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
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