CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: ARDH_CANTR (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida tropicalis GN=ARD PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15
Identity = 71/261 (27.20%), Postives = 115/261 (44.06%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRN--QIELDAR-LHEWKNKGFK---------VTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQ-LAHPLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDE-VSSLVAFLCLPAASYITGQIICVD 791
            L+G   ++TGG+ G+       L   GA +     N  + +  AR + +W  +  K         V+   C++   E  E   + +        ++L+N A      P  +  A++   +   N    F++SQ  A PL + +  GSI+ I S+ G  V       +Y   K  +  L ++LACEWAK NIR NT++P  I T + +    G   +E       + P+ R  EP E V S++      A+SY TG  + VD
Sbjct:   18 LDGKLVIITGGSGGLSAVVSRALLAKGADIALIDMNLERTQQAARDVLQWGEEQMKGKHESPIGQVSAWSCNIGDAEAVELTFKAINEHHGKVASVLINTAGYAENFPAEEYPAKNAENIMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLTRNVISG--HTEMKTEWESKIPMKRMAEPKEFVGSILYLASDSASSYTTGHNLVVD 276          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 61/231 (26.41%), Postives = 112/231 (48.48%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAF 740
            ++     ++TG + GIG AT   LA  GA +   +R   +L+  +   K    +   +  D++ RE  +KL+E     + GK++ +  NA I+   P   +  ++   +   N + V +      P F A  +G I+  SSV G++  P  ++YGA K A+  L + L  E A++  NIRT T+ P  I T +++   +     + +  + +Q  +     PD ++S+VA+
Sbjct:    2 TIKNKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKASSGEAIFAKTDVTKREDNKKLVELAIERY-GKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKET-EQGMTNLYKQYGV----TPDRIASIVAY 226          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y432_LISMO (Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes GN=lmo0432 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 62/231 (26.84%), Postives = 112/231 (48.48%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAF 740
            ++     ++TG + GIG AT   LA  GA +   +R   +L+  +   K    +   +  D++ RE  +KL+E     + GK++ +  NA I+   P   +  ++   +   N + V +      P F A  +G I+  SSV G++  P  ++YGA K A+  L + L  E A++  NIRT T+ P  I T +++   +     + +  + +Q  I     PD ++S+VA+
Sbjct:    2 TIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERY-GKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKET-EQGMTSLYKQYGI----TPDRIASIVAY 226          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS1_MOUSE (Dehydrogenase/reductase SDR family member 1 OS=Mus musculus GN=Dhrs1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 69/255 (27.06%), Postives = 122/255 (47.84%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAH--------PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF---EEGPAGSEFLDGIARQTPIGRAGEPDEVSS--LVAFLCLPAASYITGQII 782
            + G   +VTG +RGIG     +L + GA V+   R+   L A   E ++ G +    VCD S   + + L E V    +G+L++LVNN A   V+  L+ T +    V ++ ++ + ++    H         L   +G G IV +SS GG++ + +V  YG  K A ++L  + A E  +  +   ++ P +++T M+K F   E+ P    F     +  P   + E  E+S   +VA    P    ++G+++
Sbjct:    5 MKGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRATAQEAQSLGGRCVPVVCDSSQESEVKSLFEQVDREQKGRLDVLVNN-AYAGVQAILNTTNKSFWEVPASIWDDINNVGLRGHYLCSVYGARLMVPAGKGLIVIVSSPGGLQHMFNVP-YGVGKAACDRLAADCAHELRRHGVSYVSLWPGLVQTEMVKEFMAKEDTPEDPLF----KKMKPDFSSAESPEMSGKCVVALATDPNILNLSGKVL 253          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15
Identity = 74/243 (30.45%), Postives = 110/243 (45.27%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK--LNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            TALVTG  +G+G     +L++ G  V   S     +       K  GF   G + DL   +  + ++E +  I Q K  ++IL+NNA I      + ++ ++   V   N  SVF++S+           G IV I SV G  G      Y A K  +    K+LA E A+  I  N V+P  IKT++ K                 + P+ R G  +E+++ V FL    ASYITGQ I V+
Sbjct:    7 TALVTGANQGLGKEIAIKLSQKGIQVIGTSTTVDGVKTINKYLKKNGF---GFILDL---KDTDSILEKMKEICQKKYSIDILINNAGITSDNLLVYMSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNLNVFQYKKHL-----SKIPMKRIGTAEEIANAVIFLSSEKASYITGQTIHVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: MTDH_ALTAL (Probable NADP-dependent mannitol dehydrogenase OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15
Identity = 71/258 (27.52%), Postives = 112/258 (43.41%), Query Frame = 3
Query:   51 WSLNGMTALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQT-----PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +SL G   +VTG  G  GIG       A +GA +     ++ E  +    E   K G KV    C ++   Q EKL++ V   F GK+++ + NA        LD T E  + V  T+    F+ ++     F+    GS+V  SS+ G +   P     Y   K     L K+LA EW +D  R N+++P  I T +          S+F+    ++      P+GR  +  E+     +    A+SY TG  + +D
Sbjct:   15 FSLKGKVVIVTGASGPTGIGTEAARGCAEYGADLAITYNSRAEGAEKNAKEMSEKYGVKVKAYKCQVNEYAQCEKLVQDVIKDF-GKVDVFIANAGKTADNGILDATVEQWNEVIQTDLTGTFNCARAVGLHFRERKTGSLVITSSMSGHIANFPQEQASYNVAKAGCIHLAKSLANEW-RDFARVNSISPGYIDTGL----------SDFVPQDIQKLWHSMIPMGRDAKATELKGAYVYFASDASSYCTGSDLLID 260          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHMA_FLAS1 (N-acylmannosamine 1-dehydrogenase OS=Flavobacterium sp. (strain 141-8) PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15
Identity = 74/253 (29.25%), Postives = 108/253 (42.69%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPT-LDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS------IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK-TSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G  A+VTG   GIG ATVE   R GA V       ++L  RL   + +        CDL+ R   +  +    +   G L+ILV   A+       LD++  D       N    F   +       A+G G       I+ I SV      P  + Y A KG +  LT+ +A + A+  I  N +AP  +  T     + E     + LD +A    +GR G P+EV++   FL    +S+ITG  I +D
Sbjct:   13 LAGKAAIVTGAAGGIGRATVEAYLREGASVVA-----MDLAPRLAATRYEEPGAIPIACDLADRAAIDAAMADAVARLGG-LDILVAGGALKGGTGNFLDLSDADWDRYVDVNMTGTFLTCRAGARAMVAAGAGKDGRSARIITIGSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPVDVTGNNTGYSEPRLAEQVLDEVA----LGRPGLPEEVATAAVFLAEDGSSFITGSTITID 255          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15
Identity = 73/249 (29.32%), Postives = 116/249 (46.59%), Query Frame = 3
Query:   63 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTL---DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQ----TPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            G   +VTGG RGIG   V      GA V  C +++    A   E     F +    CD++  E    L+      F G+L+ +VNNA   +  P     + +A+    +   N    + L++LA P  + S  G+++ ISS+ G  G      Y A KGA+  +TK LA + ++  +R N ++P  I T +   +EE  A +       R+     P+GR G+P EV++   FL    A++ TG  + V
Sbjct:    9 GKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEARGRAVERELPGTVFLL----CDVTREEDVRTLVSETIRRF-GRLDCIVNNAG--YHPPPQWPEETSAQGFRQLLELNLLGTYTLTKLALPHLRKS-RGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPL---WEELAASTPDPTATIREGTLAQPLGRMGQPAEVAAAAVFLA-SEATFCTGTELLV 245          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: ARDH_CANAL (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida albicans GN=ARD1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.628e-15
Identity = 74/262 (28.24%), Postives = 118/262 (45.04%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRN--QIELDAR-LHEWKNKGFK---------VTGSVCDLSSREQREKLIETVTSIFQGKLN-ILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQ-LAHPLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDE-VSSLVAFLCLPAASYITGQIICVD 791
            L+G   ++TGG+ G+       L   GA V     N  + +  AR + +W  +  K         V+   C++   E  +   + +     GK++ +LVN A      P  +  A++   +   N    F++SQ  A PL + +  GSI+ I S+ G  V       +Y   K  +  L ++LACEWAK NIR NT++P  I T + +    G   +E       + P+ R  EP E V S++      A+SY TG  + VD
Sbjct:   17 LDGKLVILTGGSGGLAAVVSRALLAKGADVALVDMNLERTQQAARDVLQWGEEQMKGKYESPIGQVSAWSCNIGDAEAVDLTFKAINE-HHGKISSVLVNTAGYAENFPAEEYPAKNAENLMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLTRNVISG--HTEMKTEWESKIPMKRMAEPKEFVGSILYLASESASSYTTGHNLVVD 275          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14
Identity = 74/253 (29.25%), Postives = 112/253 (44.27%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRA---GEP-------DEVSSLVAFLCLPAASYITGQIICVD 791
            TA++TG T GIG A    LA+ GA IV        E+     E        V     D++   +   ++  V   F G  +ILVNNA + FV+   D   E    + + N  S FH  + A P  K  G G I+ I+S  G+   P  S Y A K  +  LTK +A E A+  +  N++ P  + T +++      A +    GI  +  I      G+P       ++V+SL  +L    A+ ITG  + +D
Sbjct:    4 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTR---GITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMD 252          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
ARDH_CANTR2.007e-1527.20D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
Y452_LISIN2.622e-1526.41Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
Y432_LISMO3.424e-1526.84Uncharacterized oxidoreductase Lmo0432 OS=Listeria... [more]
DHRS1_MOUSE3.424e-1527.06Dehydrogenase/reductase SDR family member 1 OS=Mus... [more]
FABG_BUCAP4.472e-1530.453-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
MTDH_ALTAL7.628e-1527.52Probable NADP-dependent mannitol dehydrogenase OS=... [more]
DHMA_FLAS17.628e-1529.25N-acylmannosamine 1-dehydrogenase OS=Flavobacteriu... [more]
DHB14_BOVIN7.628e-1529.3217-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
ARDH_CANAL7.628e-1528.24D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
BDHA_RHIME1.301e-1429.25D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
back to top