CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: HCDR_XANP2 (2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.899e-14
Identity = 74/245 (30.20%), Postives = 104/245 (42.45%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGAIVHTC--SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPT--LDIT-AEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            A+VTG + G G A        G  V     S   +E  AR H W     KV     D++        I      F G +++LVNNA I        L  T  E    V + N   +F   +   P     G G IV I+SV  +   P  S Y   KGA+ QLTK++A ++A   IR N V P +I+T M +   + P   E  D +  + P    G   +V+  V FL    A+Y+ G  + +D
Sbjct:    5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTH-WHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP---ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMD 244          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG6_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.899e-14
Identity = 57/169 (33.73%), Postives = 79/169 (46.75%), Query Frame = 3
Query:  288 FQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCL-PAASYITGQIICVD 791
            + G+++++ NNA I               TV + N   VF  SQ A  +      G I+ I+SV G+ G    + Y A K  +   +K  A E A  NI  N V P  I + M         G +    I    P+GR G+P++V+ LV FL L PAASYITGQ   +D
Sbjct:   48 YWGQIDVIANNAGI---------------TVIALNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASEMTAKL-----GEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTID 196          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14
Identity = 49/190 (25.79%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14
Identity = 49/190 (25.79%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14
Identity = 49/190 (25.79%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: MTDH_CLAHE (Probable NADP-dependent mannitol dehydrogenase OS=Cladosporium herbarum PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.944e-14
Identity = 70/257 (27.24%), Postives = 110/257 (42.80%), Query Frame = 3
Query:   54 SLNGMTALVTG--GTRGIGHATVEELARFGAIVHT--CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQ-----TPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            SL G   +VTG  G +G+G       A  GA V     SR Q   +      K  G K     C + S E  EKL++ V + F G+++  + NA        LD + E  + V   +    FH ++     FK  G GS+V  +S+ G +   P   + Y   K     + ++LA EW +D  R N+++P  I T +          S+F+    +Q      P+GR G   E+     +    A++Y TG  + +D
Sbjct:   17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RDFARVNSISPGYIDTGL----------SDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLID 261          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.944e-14
Identity = 67/245 (27.35%), Postives = 106/245 (43.27%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G  AL+TGG  G+G A  +  A  GA V     N+      + E +  G        D++        I      F G L  L N A I+      + + E  + + + N  ++F   + A P    SGNGSI+ ISS+ G+      + Y A K A+  ++K  A E+    +R NT+ P  + T +           + L     Q P+G+ G+P ++++   FL    A YITG  + +D
Sbjct:    5 LAGKVALITGGASGLGAAQAKRFAEEGAKVVIGDLNEEMAKGVVAEIRAAGGDALFIRLDVTDAASWNNAIAAAVDGFGG-LTTLSNTAGIIHPGGFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPI-----TANVPPDVLKQQTSQIPMGKLGDPIDIANGALFLASDEAKYITGVDLPID 243          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DCXR_TRIRE (L-xylulose reductase OS=Trichoderma reesei GN=lxr1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.944e-14
Identity = 72/259 (27.80%), Postives = 112/259 (43.24%), Query Frame = 3
Query:   51 WSLNGMTALVTG--GTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQT-----PIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +SL G   +VTG  G RG+G       A  GA   I ++  +   E +A     K  G KV     + S     E+ +  V S F GK++  + NA        +D +A D   V   +     + ++     FK  G+GS+V  +S+ G V   P     Y   K     L ++LA EW +D  R N+++P  I T +          S+F+D   ++      P+GR G+  E+     +L   A+SY TG  I +D
Sbjct:   15 FSLKGKVVVVTGASGPRGMGIEAARGCAEMGADLAITYSSRKEGAEKNAE-ELTKEYGVKVKVYKVNQSDYNDVERFVNQVVSDF-GKIDAFIANAGATANSGVVDGSASDWDHVIQVDLSGTAYCAKAVGAHFKKQGHGSLVITASMSGHVANYPQEQTSYNVAKAGCIHLARSLANEW-RDFARVNSISPGYIDTGL----------SDFIDEKTQELWRSMIPMGRNGDAKELKGAYVYLVSDASSYTTGADIVID 260          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14
Identity = 65/247 (26.32%), Postives = 96/247 (38.87%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK-------PFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            ALVTG   GIG     E AR GA V          +    +   +GF       D++   Q    +  +   + G+L+ILVNNA I  V P  +   +    +      + F   +   P+ K    G I+ I+SV G+ G    S Y + K  +  LTK  A E A   I  N + P  + T +++            P  S     I    P  R     E++    FL    A  +TGQ + +D
Sbjct:    6 ALVTGAAGGIGFEIAREFAREGASVIVSDLRPEACEKAASKLAEEGFDAAAIPYDVTKEAQVADTVNVIQKQY-GRLDILVNNAGIQHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKGVTGQAVVLD 251          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14
Identity = 52/205 (25.37%), Postives = 100/205 (48.78%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLD 671
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   +  Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++   +   P+  + LD
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAY--NPSDRKKLD 203          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
HCDR_XANP22.899e-1430.202-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG6_BRANA2.899e-1433.733-oxoacyl-[acyl-carrier-protein] reductase (Fragme... [more]
Y2778_STAA83.786e-1425.79Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC3.786e-1425.79Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA33.786e-1425.79Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
MTDH_CLAHE4.944e-1427.24Probable NADP-dependent mannitol dehydrogenase OS=... [more]
LINX_PSEPA4.944e-1427.352,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
DCXR_TRIRE4.944e-1427.80L-xylulose reductase OS=Trichoderma reesei GN=lxr1... [more]
YXJF_BACSU6.457e-1426.32Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
Y2403_STAAW8.434e-1425.37Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
back to top