CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14
Identity = 52/205 (25.37%), Postives = 100/205 (48.78%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLD 671
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   +  Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++   +   P+  + LD
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPT--DVTNKEEVDELIKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAY--NPSDRKKLD 203          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB4_HUMAN (Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14
Identity = 65/238 (27.31%), Postives = 105/238 (44.12%), Query Frame = 3
Query:   60 NGMTALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 746
            +G   LVTG   G+G A     A  GA+V             +  +  D  + E + +G K   +V +  S E+ EK+++T    F G+++++VNNA I+  +    I+ ED   +   +    F +++ A    K    G I+  SS  G+ G    + Y A K  +  L  +LA E  K NI  NT+AP               AGS     +  +  +  A +P+ V+ LV +LC
Sbjct:    8 DGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGK---AVANYDSVEEGEKVVKTALDAF-GRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAP--------------NAGSRMTQTVMPEDLV-EALKPEYVAPLVLWLC 226          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 51/205 (24.88%), Postives = 101/205 (49.27%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLD 671
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++L++     F G L+I++N+A  +      D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++   +   P+  + LD
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAY--NPSDRKKLD 203          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 51/205 (24.88%), Postives = 101/205 (49.27%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLD 671
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++++E+ ++L++     F G L+I++N+A  +      D   ++  ++   N +   + +Q A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++   +   P+  + LD
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAY--NPSDRKKLD 203          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: ENTA_ECOLI (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Escherichia coli (strain K12) GN=entA PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 65/249 (26.10%), Postives = 109/249 (43.78%), Query Frame = 3
Query:   60 NGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP-FEEGPAGSEFLDGIARQ----TPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +G    VTG  +GIG+AT       GA V    +           +  + +     V D++   Q  ++ + + +  + +L+ LVN A I+ +  T  ++ ED     + N    F+L Q     F+    G+IV ++S         +S YGA K A+  L  ++  E A   +R N V+P    T M +  +    A  + + G   Q     P+G+   P E+++ + FL    AS+IT Q I VD
Sbjct:    4 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMDVADAAQVAQVCQRLLAETE-RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVD 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 69/249 (27.71%), Postives = 114/249 (45.78%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G   ++TG + G+G +     A   A  +V+  S+          E K  G +      D++       L+++    F GKL++++NNA +     + +++  D + V  TN    F  S+ A   F  +   G+++ +SSV   +   P    Y A KG M  +T+ LA E+A   IR N + P  I T +     E  A  E    +    P+G  GEP+E+++ VA+L    ASY+TG  +  D
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI---NAEKFADPEQRADVESMIPMGYIGEPEEIAA-VAWLASSEASYVTGITLFAD 248          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 52/193 (26.94%), Postives = 93/193 (48.19%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            L    A+VTG + GIG +  E LA  G  V    R++    E+  R+ +  NK   V  S+ D++ +E+  +L+E     F G+++ILVN+A ++      +   E    +   N +   +      P      +G I+ I+S+ G       +LY A K A++ +T+ L  E AK  +R  +++P ++ T +
Sbjct:    4 LQDKVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQD--NKQAVVETSIVDVTHKEEVTELVEKTKEKF-GQIDILVNSAGLMLSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPL 193          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 76/278 (27.34%), Postives = 118/278 (42.45%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPL--------FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM-IKPFEEG--------------------PAGSEF--LDGIAR--QTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L+G  A+VTGG RGIG A V   A+ GA V     +    +A        G +V+   CD+S  +   + ++   S   G+L++  NNA ++  +      A  + +  +  F+ V  ++ L   L              GSIV ++SV  V G      Y A K A+  LTKN ACE     +R N V+P+ + T M I  + +G                    P+  E   ++ + R   T  G    P +++  V FL    A YI+G  + VD
Sbjct:   53 LDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASAL---GPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTR---AARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVD 324          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 76.6406 bits (187), Expect = 1.879e-13
Identity = 75/247 (30.36%), Postives = 104/247 (42.11%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G  ALVTGG  G+G   V+ L   GA V     N+        E   +   V   V    S E    L+        G LN+LVNNA I+          ED S +   N ESVF   Q      K +G GSI+ ++SV     I   + Y A K A++ LT+  A    K    IR N++ P  I T M++         E +    +    GRA  P+ ++ LV FL    +S ++G  +  D
Sbjct:    5 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV----SSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHAD 246          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13
Identity = 48/190 (25.26%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            L    A+VTG   GIG A    L   GA V    RN+ +L    ++      KV  +  D++ +E+ ++LI+     F G L+I++N+A  +      D   ++  ++   N +   + ++ A P      +G ++ I+S+ G     S ++Y A K A++ +T+ L  E AK  ++  +++P ++ T++
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTKKEEVDELIKMAQQTF-GGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
Y2370_STAAS8.434e-1425.37Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
DHB4_HUMAN8.434e-1427.31Peroxisomal multifunctional enzyme type 2 OS=Homo ... [more]
Y2478_STAAM1.101e-1324.88Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN1.101e-1324.88Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]
ENTA_ECOLI1.101e-1326.102,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
DHGB_BACME1.101e-1327.71Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
Y0419_STAS11.439e-1326.94Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
TS2_MAIZE1.439e-1327.34Sex determination protein tasselseed-2 OS=Zea mays... [more]
3BHD_COMTE1.879e-1330.363-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]
Y2567_STAAR2.454e-1325.26Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
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