CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y4EK_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4eK OS=Rhizobium sp. (strain NGR234) GN=NGR_a03840 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12
Identity = 58/188 (30.85%), Postives = 89/188 (47.34%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTL-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 632
            ALVTG + GIG A   ELA  G  V    R++  LD  LH        +   V DLS       + E    I   K+++LVNNA ++    +L D++ +D+  +   N  SVF L++           G I F  S GG+   P+ S+YGA K A++  +  L C+     IR   + P  ++T++ +
Sbjct:   10 ALVTGASSGIGKAIALELASAGLRVLALGRDRAALD-ELHSTAG----IVPVVFDLSD------VSEVYGKIAGEKIDVLVNNAGLLTASASLVDLSEDDIDAMIDINIRSVFKLTRHVLKQMIERRRGHIFFTGSSGGLAPHPNSSVYGATKAAVSLFSSALRCDLIGLPIRVTELFPGRVETNLYR 186          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YLX6_SCHPO (Uncharacterized oxidoreductase C922.06 OS=Schizosaccharomyces pombe GN=SPAC922.06 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 74/254 (29.13%), Postives = 115/254 (45.28%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAE----DMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            ++ G   L+TG   GIG    +     G   A +     ++++ DA L               D+S  +Q E  IE V     G +++L+NNA +    P   ++ E    D+S V   N+ +  ++  + H + K    GSIV I SV G   + S + Y A K  +  LTK LA  +    IR N  AP  I   +  + F++ P   +  D + R  P+GR G P++V+  V FL     S+ITG  + VD
Sbjct:    2 TVEGRVVLITGAAGGIGKVLCKMFTELGDRVAGIDIVDPSKVQ-DAAL-----------ALQADVSKADQIETAIEKVIQTL-GPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYV--IPH-MAKQGKGGSIVNIGSVNGHIYLGSPA-YSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDERFKKHP---DVGDRMKRWYPVGRLGTPEDVARAVIFLADSKNSFITGTTLYVD 235          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 58/209 (27.75%), Postives = 97/209 (46.41%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIA 680
            SL     L+TG   G+G    +  A++GA V     +  +    + E K  G +      D++  +  E +I+ V   + G ++ILVNNA I+  +    ++ ++  +V   +    F+LS+LA P F     G I+ I+S  G+ G    + Y + K  +  L+K +A E AK+NI+ N VAP       +  F E        D +A
Sbjct:  319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV--NDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLTIFREQDKNLYHADQVA 522          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_SCHPO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Schizosaccharomyces pombe GN=oar2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 63/242 (26.03%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   75 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS----IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQII 782
            L+TGG+ G+G    +  ++ G   H   RN+  L   L      KG + T ++ D+ S       ++ + SIF+  +++ +V+ A ++     +  + +++ ++  TN  S   LS++A   +  + N      I+ ISS      +P  S+Y A K  +   TK LA E A   IR N ++P  + T M+         S+      ++ PIGR    DE+     FL      Y TG I+
Sbjct:    5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSD------MKNLKSIFESVEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML--------SSQIRAIAEKKVPIGRLASTDEIVDACTFLL--DNRYTTGTIL 230          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB12_HUMAN (Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens GN=HSD17B12 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12
Identity = 60/196 (30.61%), Postives = 99/196 (50.51%), Query Frame = 3
Query:   63 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-TGSVC-DLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTV----SSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 632
            G  A+VTG T GIG +  EELA+ G  V   SR++ +LD    E K K FKV T ++  D +S +  +K+    T +   ++ ILVNN  + +  P   +   D+  V     + N  SV  ++QL  P       G+I+ ISS  G+  +P +++Y A K  ++  ++ L  E+    +   +V P+ + T + K
Sbjct:   50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEK-FKVETRTIAVDFASEDIYDKI---KTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAK 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y3106_PSEAE (Uncharacterized oxidoreductase PA3106 OS=Pseudomonas aeruginosa GN=PA3106 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.628e-12
Identity = 78/246 (31.71%), Postives = 107/246 (43.50%), Query Frame = 3
Query:   60 NGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVK--PTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            NG  ALVTG  RGIG      L   G  V   + N  E  AR+ E    G        D++   Q    +  V   F G+L+ LV NAAI   +  P   ++  + +   + N      L++   P  +A  NG+IV I+S    +  P    Y A KG +  LT  LA     D IR N ++P  I T      E  P      D    Q  +GR G  ++V+SLVA+L    A ++TGQ   VD
Sbjct:    9 NGKVALVTGAARGIGLGISAWLIAEGWQV-VLADNDRERGARVAE--ALGEHAWFVAMDVAQEGQVAMSVAEVLGQF-GRLDGLVCNAAIANPRNTPLEALSLGEWTRTLAVNLTGPMLLAKYCTPYLRAH-NGAIVNIASTRAHQSEPDSEAYAASKGGLLALTHALAASLGPD-IRVNALSPGWIDTREAAEREAAPLTELDHD----QHLVGRVGTVEDVASLVAWLLSEDAGFVTGQEFLVD 244          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: UXUB_BACSU (Uncharacterized oxidoreductase uxuB OS=Bacillus subtilis GN=uxuB PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12
Identity = 71/265 (26.79%), Postives = 116/265 (43.77%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNA------AIVFV---------KPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF---EEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAAS-YITGQIICVD 791
            +L G TA++TGG+  +  A   ELAR G  V   +R   +  A + E    G        D+  R   E+  E +   F G +++L+N A      AI  V         +   D+      TV STNF   F  SQ+       + + +I+ +SS+     +  V  Y A K ++N  T  +A  +A+  +R N +AP    T         ++G   S     IA  TP+ R G+P+++   + +L   + S ++TG  + VD
Sbjct:    7 NLAGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAVVKEITAAGGTACAVAADVLDRMSLERAKEDILGQF-GAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLLINQDGTFTSRSHKIIA-GTPMKRFGKPEDLLGTLLWLADESYSGFVTGITVPVD 269          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: VIBA_VIBCH (Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Vibrio cholerae GN=vibA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 74/259 (28.57%), Postives = 112/259 (43.24%), Query Frame = 3
Query:   45 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSS----REQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP-FEEGPAGSEFLDGIARQ----TPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            K  SL     L+ G  RGIG + +E L + GA V       Q+ L+           ++T    DL+     REQ  +  E V        + LV  A I+ V P  ++  E +S++ + N   V    Q      KA   GS+V I S        S+  YGA K A++ L K +  E A   IR N V+P   +T+M +  + E    ++ + G A Q     P+ +  EP +++  V FL    A +IT   + VD
Sbjct:    2 KDMSLVNSKVLLVGSARGIGFSVLEHLLQAGAQVMAADCEWQLLLEQSESLLGRYPDQLTLKKLDLAEPEAVREQVNQWAEQVAGF-----DHLVCCAGILHVAPLHEMPMEQVSSIFTVNAFGVLACMQGVASSMKARQQGSMVIIGSNAANTPRMSIGAYGASKAALHMLVKCIGMELAPYGIRCNLVSPGSTRTAMQQQLWTEQYGEAQVIAGDAAQFRLGIPLNKIAEPADIAQAVLFLLSDNAGHITLHDLRVD 255          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 67/230 (29.13%), Postives = 103/230 (44.78%), Query Frame = 3
Query:   63 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP--WVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLC 746
            G  ALVTGG  GIG A     AR GA V     + +  D  ++E K  G K  G+     S E  + +++     F G+++I+VNNA I+  K   ++       V + +    + +++ A P F     G ++  +S  G+ G    + Y A K A+   ++ +A E AK NI  NT+AP      T  I P E                 + +A +PD V+ LV  LC
Sbjct:  314 GRVALVTGGGAGIGRAYCLAFARAGASVVV--NDLVNPDDVVNEIKKMGGKAVGAKF---SAEDGDAVVKAAIDAF-GRVDIVVNNAGILRDKAFHNMDDSLWDPVMNVHARGTYKVTKAAWPYFLKQKYGRVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALEGAKYNIYVNTIAPNAGTAMTKTILPEE-----------------LVQAFKPDYVAPLVLALC 520          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABI_ANASP (Enoyl-[acyl-carrier-protein] reductase [NADH] OS=Anabaena sp. (strain PCC 7120) GN=fabI PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 73/263 (27.76%), Postives = 112/263 (42.59%), Query Frame = 3
Query:   54 SLNGMTALVTG--GTRGIGHATVEEL----ARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFE--------SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGS--EFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +L G  ALVTG    R I     ++L    A  G       R + E   + L E  N    +    C++ + EQ +   +T+   + G+L+IL++  A        D    D S  S   F         S+  LS  A PL   +  GSI+ +S +GGVR +P+ ++ G  K  +    + LA E    NIR N ++   I+T           G   + +  + +  P+ R     EV +  AFL    AS ITGQ++ VD
Sbjct:    3 NLTGKNALVTGIANNRSIAWGIAQQLHAAGANLGITYLPDERGKFEKKVSELVEPLNPSLFLP---CNVQNDEQIQSTFDTIRDKW-GRLDILIHCLAFA----NRDDLTGDFSQTSRAGFATALDISTFSLVQLSGAAKPLM--TEGGSIITLSYLGGVRAVPNYNVMGVAKAGLEASVRYLASELGSQNIRVNAISAGPIRT-----LASSAVGGILDMIHHVEQVAPLRRTVTQLEVGNTAAFLASDLASGITGQVLYVD 250          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
Y4EK_RHISN2.713e-1230.85Uncharacterized short-chain type dehydrogenase/red... [more]
YLX6_SCHPO3.543e-1229.13Uncharacterized oxidoreductase C922.06 OS=Schizosa... [more]
FOX2_CANTR3.543e-1227.75Peroxisomal hydratase-dehydrogenase-epimerase OS=C... [more]
FABG_SCHPO3.543e-1226.033-oxoacyl-[acyl-carrier-protein] reductase OS=Schi... [more]
DHB12_HUMAN3.543e-1230.61Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens... [more]
Y3106_PSEAE4.628e-1231.71Uncharacterized oxidoreductase PA3106 OS=Pseudomon... [more]
UXUB_BACSU7.894e-1226.79Uncharacterized oxidoreductase uxuB OS=Bacillus su... [more]
VIBA_VIBCH1.031e-1128.57Vibriobactin-specific 2,3-dihydro-2,3-dihydroxyben... [more]
FOX2_NEUCR1.031e-1129.13Peroxisomal hydratase-dehydrogenase-epimerase OS=N... [more]
FABI_ANASP1.759e-1127.76Enoyl-[acyl-carrier-protein] reductase [NADH] OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
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