CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig805 contig Csv1_Contig805:12..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DH12B_DANRE (Estradiol 17-beta-dehydrogenase 12-B OS=Danio rerio GN=hsd17b12b PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 54/200 (27.00%), Postives = 95/200 (47.50%), Query Frame = 3
Query:   48 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAED----MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 632
            R S  G  A+VTG T GIG A  EELAR G  +   SR Q +LD      ++K    T ++  D  S +   K+   +  +   ++ +LVNN  + +  P   +   D    ++ + + N  SV  +++L  P       G I+ ++S  G+  +P ++LY + K  ++  ++ L  E+    I   +V P+ + T + K
Sbjct:   43 RASSLGKWAVVTGATDGIGKAYAEELARRGFAIVLISRTQEKLDEVSKAIESKYKVETKTISADFGSVDIYPKIESGLAGL---EIGVLVNNVGVSYSYPEFFLNIPDVDSFINNMININIMSVCQMTRLVLPRMVDRSKGVILNVASASGMYPVPLLTLYSSTKAFVDFFSRGLDAEYKSKGIIIQSVLPFYVTTKLSK 239          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YWFH_BACSU (Bacilysin biosynthesis oxidoreductase ywfH OS=Bacillus subtilis GN=ywfH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.297e-11
Identity = 67/251 (26.69%), Postives = 109/251 (43.43%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELA--RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY--GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFL------DGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            TA V G ++GIG A   +LA   F  ++++ + + IE        K+    V     D+S +  R  + + + S   G+L++L+NN          +   EDM+   +    +     + A  L K +  G I+ I  VG +   P  +++       A+   +KN++ + A  NI  N + P  I T     F E       +      + IA   P+ R G  +E ++L AFL    ASYITGQ I  D
Sbjct:    5 TAFVMGASQGIGKAIALKLADQHFSLVINSRNLDNIESVKEDILAKHPEASVIVLAGDMSDQHTRAGIFQKIESQC-GRLDVLINNIPGGAPDTFDNCNIEDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINI--VGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQIASGIPMKRVGSAEETAALAAFLASEEASYITGQQISAD 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHB12_MOUSE (Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.297e-11
Identity = 57/210 (27.14%), Postives = 103/210 (49.05%), Query Frame = 3
Query:   63 GMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMST----VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI---KPFEEGPAGSEFL 668
            G  A+VTGGT GIG A  EELA+ G  +   SR+Q +L+   +  K K    T ++  D S  +  +K+   ++ +   ++ +LVNN  + +  P   +   D+      + + N  SV  +++L  P       G I+ ISS  G+  +P +++Y A K  ++  ++ L  E+    I   +V P+++ T +    KP  + P+   F+
Sbjct:   50 GEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEKFNVETRTIAVDFSLDDIYDKIKTGLSGL---EIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSVCKVTRLVLPGMVERSKGVILNISSASGMLPVPLLTIYSATKAFVDFFSQCLHEEYKSKGIFVQSVMPYLVATKLAKIQKPTLDKPSAETFV 256          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YVAG_BACSU (Uncharacterized oxidoreductase yvaG OS=Bacillus subtilis GN=yvaG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 67/258 (25.97%), Postives = 106/258 (41.09%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVT--GSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT----SMIKPFEEG------PAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +L G TALVTG T GIG A    LA  GA V    R + +++  + E K +  +     +  DL + E   +L +    +     +ILVNN  I       DI  ++       N  S   L++           G ++FI+S   +     ++ Y A K     ++++LA      N+  NTV P    T    +M+     G       A + F+      + I R   P+E++  V FL  P +S I G  +  D
Sbjct:    4 NLQGKTALVTGSTSGIGKAIASSLAEEGAAVIINGRREEKVNQTIDELKTQHAEAVLYPAAFDLGTEEGCNELFQAYPEV-----DILVNNLGIFEPAEYFDIPDDEWFRFFEVNIMSGVRLTRRYLHNMIEKKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSISRSLAELATGTNVTVNTVMPGSTLTEGVETMLNSLYPGENLTVQEAEARFMKENRPTSIIQRLIRPEEIAHFVTFLSSPLSSAINGAALRAD 256          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: YCP8_SCHPO (Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe GN=SPCC663.08c PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 55/208 (26.44%), Postives = 87/208 (41.83%), Query Frame = 3
Query:   78 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPAGSEFLDGIARQ 686
            + GG RGIG + V+EL+     V   S  +     +L EW      V     D+SS E   +  + VT +      + VN+A      P ++   +  ++   TN     H+ Q  +PL K   +  IVF SS+ G  G     S S YG  K A+N   K ++ E   +     ++ P  ++T   +    +      E LD  A+Q
Sbjct:   10 IAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAFYPLIKKGRSKIIVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTMKEISFELQDEGFIVISIHPGAVRTDSAQEIVNQHAEKKPEILDLFAKQ 217          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: RDHE2_MOUSE (Epidermal retinol dehydrogenase 2 OS=Mus musculus GN=Sdr16c5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 57/200 (28.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:   48 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD---NIRTNTVAPWVIKTSMIK 632
            R ++ G   L+TG   G+G     + AR GA++     N+ E +   H+   +    +V    CD S RE+  ++ + V     G ++IL+NNA IV  +  LD   + M      NF++   + +   P   A+ +G +V ISS  G+ G+  +S Y A K A     +++  E        I+T  V P+ IKT M +
Sbjct:   35 RKNVAGEIVLITGAGSGLGRLLALQFARLGAVLVLWDVNK-EANDETHQLAREAGAARVHAYTCDCSRREEVYRVADQVKKEV-GDVSILINNAGIVTGRNFLDCPDDLMEKSFDVNFKAHLWMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFAALGFAESMFIETLAKKQWGIKTTIVCPFFIKTGMFE 232          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS7_ANOGA (Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11
Identity = 58/195 (29.74%), Postives = 81/195 (41.54%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-----CDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 626
            LNG   L+TG + G+G A        G  V   +R + EL+    +       V          DLS        +++V  I  G ++ILVNN  I      L    +    +   N+     L++   P   A   G IV ISSV G   IP  S Y A K AM     +L  E AKDNI+   ++P  I T++
Sbjct:   46 LNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDLLELHATVPTHPPIILPLDLSDLNSIGGKVQSVLEI-HGAIDILVNNGGISVRGDALSTAIDVDIRIMLVNYFGSVALTKACLPSMMARKEGRIVSISSVQGKFAIPHRSAYSASKHAMQAFCDSLRAEVAKDNIKVTLISPGYINTAL 239          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: AYR1_YEAST (NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Saccharomyces cerevisiae GN=AYR1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 3
Query:   72 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-----GKLNILVNNAAIVFVKPTLDITAEDMSTVSSTN-FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 587
            A+VTG + GIG+   +ELAR G +V+ C+R    +     ++ N   K      D+S  E+    I T +   +     GKL++L NNA      P LD T   +      N F  +    +L+  L KA G  +IVF  S+ GV   P  S+Y A K A++Q  + L  E    N+R
Sbjct:   12 AVVTGASGGIGYEVTKELARNGYLVYACARRLEPMAQLAIQFGNDSIKPYK--LDISKPEE----IVTFSGFLRANLPDGKLDLLYNNAGQSCTFPALDATDAAVEQCFKVNVFGHINMCRELSEFLIKAKG--TIVFTGSLAGVVSFPFGSIYSASKAAIHQYARGLHLEMKPFNVR 181          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FOX2_YEAST (Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae GN=FOX2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 65/206 (31.55%), Postives = 96/206 (46.60%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI-ETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP-FEEGPAGSEF 665
            SL     +VTG   G+G +     AR+GA V     N I+    + E  NK +    ++ D         LI +T  S FQ +++ILVNNA I+  K  L +  E+   V   +  S F LS+   P+F    +G I+  +S  G+ G    + Y A K A+   +K +A E AK  I  N +AP   +T+M K  F E    + F
Sbjct:  319 SLCNKVVVVTGAGGGLGKSHAIWFARYGAKVVV---NDIKDPFSVVEEINKLYGEGTAIPDSHDVVTEAPLIIQTAISKFQ-RVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSKAVWPIFTKQKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAPHA-ETAMTKTIFSEKELSNHF 519          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
DH12B_DANRE1.759e-1127.00Estradiol 17-beta-dehydrogenase 12-B OS=Danio reri... [more]
YWFH_BACSU2.297e-1126.69Bacilysin biosynthesis oxidoreductase ywfH OS=Baci... [more]
DHB12_MOUSE2.297e-1127.14Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus... [more]
YVAG_BACSU3.000e-1125.97Uncharacterized oxidoreductase yvaG OS=Bacillus su... [more]
YCP8_SCHPO3.000e-1126.44Uncharacterized oxidoreductase C663.08c OS=Schizos... [more]
RDHE2_MOUSE3.000e-1128.50Epidermal retinol dehydrogenase 2 OS=Mus musculus ... [more]
DHRS7_ANOGA3.918e-1129.74Dehydrogenase/reductase SDR family protein 7-like ... [more]
AYR1_YEAST3.918e-1132.02NADPH-dependent 1-acyldihydroxyacetone phosphate r... [more]
FOX2_YEAST5.117e-1131.55Peroxisomal hydratase-dehydrogenase-epimerase OS=S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
back to top