CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig805 contig Csv1_Contig805:12..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.462e-23
Identity = 81/244 (33.20%), Postives = 124/244 (50.82%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++LVNNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ VAFL    A YITGQ I V+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.462e-23
Identity = 81/244 (33.20%), Postives = 124/244 (50.82%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++LVNNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ VAFL    A YITGQ I V+
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.462e-23
Identity = 81/245 (33.06%), Postives = 124/245 (50.61%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G T+L+TG + GIG A    L + G+ V     N+ +L +  +  K+     T  +C+L+++E+   LI         KL+ILV NA I      + +  ED   V   N ++ F L++ A      +  G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  N VAP  IK+ M     E     +  + I ++ P+G  G P++V++ VAFL    ASYITGQ I V+
Sbjct:    4 LTGKTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLKSLGNVLKDN---YTIEICNLANKEECSNLISKAP-----KLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE-----KQREAIVQKIPLGTYGMPEDVANAVAFLASDQASYITGQTIHVN 235          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 85/254 (33.46%), Postives = 124/254 (48.82%), Query Frame = 3
Query:   57 LNGMTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G TA+++G    RGIG AT E  A  GA V     N  E  A   +      G  + G  CD++ R       + V S F G  NIL+NNA I     TLDI+  D   + + N   V +LSQ+  P  + +G GSI  +SSV     GG+ G P    Y A K  +  L K +A E+  D+IR N V P +I+T +          ++ + GI    P+ R G+  +V+++  FL    ++Y+TG +I V+
Sbjct:    3 LKGKTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHI-GLRCDVADRASCTSASDEVLSAF-GVANILINNAGITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPH---YSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRADIVKGI----PLSRLGDARDVANIYLFLASDLSAYVTGAVIDVN 247          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 88/260 (33.85%), Postives = 132/260 (50.77%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIV-HTCSRNQIELDAR-----LHEWKNK-GFKVTGSV-CDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTL-DITAEDMSTVSSTNFESVFHLSQLAHPLFK------ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L    A+VTGG  GIG A     A  GA V  T  + Q E DA      L + + + G K   ++  DL   +   K+++ V   + G ++ILVNNAA  + +P++ DIT +D+  V  TN  S F +S+ A    +       +G  SI+  SS+   +G  ++  Y A KGA+   T+ LA + A++ IR N VAP  I T +I          E +     Q P+GRAG+P EV+    FL    ASY++GQ++ V+
Sbjct:   38 LKDKVAIVTGGDSGIGRAVCLCFALEGATVAFTYVKGQEEKDAEETLRALRDIRARTGAKDPMAIPADLGYDDNCRKVVDEVAGAYGGAIDILVNNAAEQYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLI----PASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDDASYMSGQMLHVN 293          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 78/244 (31.97%), Postives = 125/244 (51.23%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +ALVTG +RGIG +   +LA  G   A+ +  S+++ E  A + E K KG +      +++  ++ +++I+ V S F G +++LVNNA I      + +  ++   V  TN + VF+  Q   P      +G+I+ ++S+ G  G P  + Y A K  +  LTK  A E A   I  N VAP  I + M     +     +  D +  Q P+ R GE  ++++ VAFL    A YITGQ I V+
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAE--AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSD-----DLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVN 239          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 78/244 (31.97%), Postives = 125/244 (51.23%), Query Frame = 3
Query:   69 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +ALVTG +RGIG +   +LA  G   A+ +  S+++ E  A + E K KG +      +++  ++ +++I+ V S F G +++LVNNA I      + +  ++   V  TN + VF+  Q   P      +G+I+ ++S+ G  G P  + Y A K  +  LTK  A E A   I  N VAP  I + M     +     +  D +  Q P+ R GE  ++++ VAFL    A YITGQ I V+
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAE--AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSD-----DLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVN 239          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 80/246 (32.52%), Postives = 121/246 (49.19%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +  G  ALVTG +RGIG A  E LA  GA V   + ++    A + ++     K  G + +++     E ++E + + F G+++ILVNNA I      + +  E+ + +  TN  SVF LS+          +G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP  I+T M +   +         GI  Q P GR G   E+++ VAFL    A+YITG+ + V+
Sbjct:    2 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA-ISDYLGANGK--GLMLNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 80/246 (32.52%), Postives = 121/246 (49.19%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +  G  ALVTG +RGIG A  E LA  GA V   + ++    A + ++     K  G + +++     E ++E + + F G+++ILVNNA I      + +  E+ + +  TN  SVF LS+          +G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP  I+T M +   +         GI  Q P GR G   E+++ VAFL    A+YITG+ + V+
Sbjct:    2 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA-ISDYLGANGK--GLMLNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: CBR2_MOUSE (Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 82/248 (33.06%), Postives = 123/248 (49.60%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            + +G+ ALVTG  +GIG  TV+ L   GA V   +R   +L +   E           VC DL   +  EK +  +     G +++LVNNAA+V ++P L++T E      S N  SVF +SQ+ A  +      GSIV +SS+      P++  Y + KGAM  LTK +A E     IR N+V P V+ T M K     P   EF   +  + P+ +  E ++V + + FL    ++  +G  I VD
Sbjct:    4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEPVCVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP---EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD 238          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
FABG_STAAM4.462e-2333.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC4.462e-2333.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_RICFE4.462e-2333.063-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
Y4MP_RHISN5.827e-2333.46Uncharacterized short-chain type dehydrogenase/red... [more]
GRDH_ORYSJ5.827e-2333.85Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]
FABG_STAES7.610e-2331.973-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ7.610e-2331.973-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_SHIFL7.610e-2332.523-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI7.610e-2332.523-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
CBR2_MOUSE7.610e-2333.06Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cb... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
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