CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig805 contig Csv1_Contig805:12..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 81/247 (32.79%), Postives = 113/247 (45.75%), Query Frame = 3
Query:   63 GMTALVTGGTRGIGHATVEELARFGAIVHTCS---RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAI-VFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            G   +VTG   GIG A V+  A  G +V          IEL   L E  + G +V        SRE     +  +      ++ +LVNNA I   +  T D   ED     + N    + ++     L K     +IV ++S+ G+ G P  S Y A K  +  +TK+LAC WA   IR   VAP  ++T M+   E   AG   +  I R+ P+GR   PDE++  V FL    ASYITG  + VD
Sbjct:    9 GRVIVVTGAAGGIGRALVDIFAANGDVVVAVDLPDSGVIELGQNLGE-PHLGLEVD------VSREDDVVALRALLEKRFSRIEVLVNNAGIGPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPGA--AIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMVAELER--AGKLDVSAIRRRVPLGRIARPDEIARAVRFLASAQASYITGSTLVVD 244          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FIXR_BRAJA (Protein fixR OS=Bradyrhizobium japonicum GN=fixR PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 84/244 (34.43%), Postives = 119/244 (48.77%), Query Frame = 3
Query:   75 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGK-LNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--------NGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITG 773
            L+TG +RGIGHAT +  +  G  + +C+R   + +    E  N   F+V     DL       + I  V     G  L+ LVNNA +    PT D       T S+  +  VFHL+ +A P+  A G        +GSIV ++S+ G R  P   S Y   K A+  LT+ LA ++A   IR N +AP  I+T M+ P  E          +    P+ R G PDEV+ ++ FLC  AASY+TG
Sbjct:   40 LLTGASRGIGHATAKLFSEAGWRIISCARQPFDGERCPWEAGNDDHFQV-----DLGDHRMLPRAITEVKKRLAGAPLHALVNNAGVSPKTPTGDRMTS--LTTSTDTWMRVFHLNLVA-PILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTDMLSPDAEAR--------VVASIPLRRVGTPDEVAKVIFFLCSDAASYVTG 267          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 80/247 (32.39%), Postives = 122/247 (49.39%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G   LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E           VC DL   E  E+ + +V     G +++LVNNAA+  ++P L++T E        N  +V  +SQ+ A  L      G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P V+ TSM +     P  ++ +     + P+G+  E + V + + FL    +   TG  + V+
Sbjct:    5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTM---LNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.298e-22
Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            SL G  ALVTG +RGIG A   EL R GA+V   + +    +      K  G +  G V D+SS E     +E +     G+  I+VNNA I      + +  ++   V +TN  S++ LS+        +  G I+ I SV G  G    + Y A K  +   T+ LA E     I  N VAP  I T M +   E        + +  Q P+GR G+ +E++ +V FL    A+Y+TG  + V+
Sbjct:    2 SLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQ-HLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQR-----EALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVN 241          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22
Identity = 80/246 (32.52%), Postives = 117/246 (47.56%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            S  G  ALVTG +RGIG A  E L   GA V   + ++   +   +     G    G + +++     E ++E + + F G+++ILVNNA I      + +  ++ + +  TN  SVF LS+           G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP  I+T M +   +         GI  Q P GR G   E++S VAFL    ASYITG+ + V+
Sbjct:    2 SFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSE---NGAKNISDYLGANGKGLMLNVTDPASIESVLENIRAEF-GEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIASAVAFLASDEASYITGETLHVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22
Identity = 80/246 (32.52%), Postives = 117/246 (47.56%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            S  G  ALVTG +RGIG A  E L   GA V   + ++   +   +     G    G + +++     E ++E + + F G+++ILVNNA I      + +  ++ + +  TN  SVF LS+           G I+ I SV G  G    + Y A K  +   +K+LA E A   I  N VAP  I+T M +   +         GI  Q P GR G   E++S VAFL    ASYITG+ + V+
Sbjct:    2 SFEGKIALVTGASRGIGRAIAETLVARGAKVIGTATSE---NGAKNISDYLGANGKGLMLNVTDPASIESVLENIRAEF-GEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA-----GILAQVPAGRLGGAQEIASAVAFLASDEASYITGETLHVN 238          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 77/249 (30.92%), Postives = 122/249 (49.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPAGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G TAL+TG  +GIG       AR GA +     +  E++    E   +G + T  V D+         I+      +G+++ILVNNA +  +   LD++ +D       N + V+++++   P   A  +G IV +SSV G +   P  + Y   K A+  LTK+LA E+A+  IR N + P  ++T M +    +  P   E  L  +A+  P+ R  +P EV  L AFL    +SY+TG    +D
Sbjct:    4 LTGKTALITGALQGIGEGIARTFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVID 250          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 77/251 (30.68%), Postives = 129/251 (51.39%), Query Frame = 3
Query:   51 WSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVK-PTLDITAEDM-STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSV-SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +SL G  A VTG + GIG A  E  A+ GA V     +    D   +  K  G K     C+++  +  EK+++ + S F G ++I V NA + + + P +D+   D  + V   +  SV++ + +  P+F+  G GS +F +S+   +  +P + + Y A K  +  L+K+L+ EWA    R N+V+P  I T + + F +    S++L    + TP+GR  +P E+     +L   AASY TG  + VD
Sbjct:   31 FSLKGKVASVTGSSGGIGWAVAEGYAQAGADVAIWYNSHPADDKAEYLTKTYGVKSKAYKCNVTDFQDVEKVVKQIESDF-GTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPF-ARVNSVSPGYIATHLSE-FADPDVKSKWL----QLTPLGREAKPRELVGAYLYLASDAASYTTGADLAVD 274          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.777e-22
Identity = 77/249 (30.92%), Postives = 122/249 (49.00%), Query Frame = 3
Query:   57 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPAGSE-FLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            L G TAL+TG  +GIG       AR GA +     +  E++    E   +G + T  V D+         I+      +G+++ILVNNA +  +   LD++ +D       N + V+++++   P   A  +G IV +SSV G +   P  + Y   K A+  LTK+LA E+A+  IR N + P  ++T M +    +  P   E  L  +A+  P+ R  +P EV  L AFL    +SY+TG    +D
Sbjct:    4 LTGKTALITGALQGIGEGIARTFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVID 250          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DER_CHICK (D-erythrulose reductase OS=Gallus gallus GN=DER PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.777e-22
Identity = 76/247 (30.77%), Postives = 117/247 (47.37%), Query Frame = 3
Query:   54 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            S  G  ALVTG  +GIG A    L + GA V   SR   +L++ + E       +     DL+  +  E  +        G   +LVNNAA+  ++P L +T E +      NF +V H+SQ+      A G  G+IV +SS    R +   ++Y + K A++ L+K +A E     IR NTV P V+ T M +     P  S     +  + P+G+  E D+V + + FL    ++  TG  + VD
Sbjct:    6 SFRGRRALVTGAGKGIGRAVAVALCKAGARVTALSRTAADLESLVRECPG----IEPLCLDLADWDATEAAVGAA-----GPFELLVNNAAVAMLQPFLQVTREAVERSFDVNFRAVLHVSQIVARQMIAQGLPGAIVNVSSQASQRALRDHAVYCSTKSALDMLSKVMAMELGPHKIRVNTVNPTVVMTDMGRINWSDPQKSA---AMINRIPLGKFAEVDDVVNSILFLLSDKSAMTTGSSLMVD 240          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
Y4VI_RHISN9.939e-2332.79Uncharacterized short-chain type dehydrogenase/red... [more]
FIXR_BRAJA9.939e-2334.43Protein fixR OS=Bradyrhizobium japonicum GN=fixR P... [more]
DCXR_HUMAN9.939e-2332.39L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
FABG_PSEAE1.298e-2231.713-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
FABG_SALTY1.695e-2232.523-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI1.695e-2232.523-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
UCPA_ECO572.892e-2230.92Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
SOU2_CANAL2.892e-2230.68Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
UCPA_ECOLI3.777e-2230.92Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
DER_CHICK3.777e-2230.77D-erythrulose reductase OS=Gallus gallus GN=DER PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
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