CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 L K ++IGD+GVGKSCLLL+ R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFN 95
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 L K ++IGD+GVGKSCLLL+ R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFN 95
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSY 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSY 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSY 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF + Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTA 112
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF + Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTA 112
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19 Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCS 439 L K++LIGDSGVGKS LL R RTIE++ K+IK QIWDTAGQER+R IT+AYYRGA+G L+VYD++ SS+ NC+ Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSY-ENCN 105
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19 Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESF 110
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 161 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 +K+L+IG+SGVGKS L+LR ++ ++ +DG R+KL IWDTAGQERFRT+T +YYRGA G++ VYDVT SSF Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSF 99 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |