CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB12_CANFA (Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.506e-18 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 161 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 +++++IG GVGK+ L+ R KI+T+EL GK+I+LQIWDTAGQERF +IT+AYYR A GI+LVYD+T + +F+ Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFD 95
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.506e-18 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K+++IGDS VGKS LL R + +++ +DGK +K QIWDTAGQERFR +T+AYYRGA+G L+VYD+T S+F + Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFEN 102
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.803e-18 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K++LIGDS VGK+C++ R +R + ++GK++K+Q+WDTAGQERFRTIT +YYR A G ++ YD+T SF S Sbjct: 15 LFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFES 105
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 + K++LIGDS VGKS LL R + RT+ +D + +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T SF+ Sbjct: 18 VFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFD 107
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L KL+LIGDSGVGKS LL R R+I +D K +K QIWDTAGQER+R IT+AYYRGA+G L+VYD+T +F + Sbjct: 14 LFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFEN 104
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.280e-17 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K++LIGDS VGK+C++ +R++++DGK++K+Q+WDTAGQERFRTIT +YYR A ++ YD+T S+F S Sbjct: 17 LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFES 107
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L KL+LIGDSGVGKS LL R +++ +D K IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT ++ + Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYEN 103
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 + K+LLIGDS VGK+ LLLR K + I +DG+ LQIWDTAGQERFRTIT+++YRGA G+L+ YDVTD+ ++N+ Sbjct: 6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNN 97
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K L+IG +G GKSCLL + R + + GK +KLQIWDTAGQERFR++T +YYRGA G LLVYD+T ++N+ Sbjct: 8 LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNA 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.672e-17 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 + K ++IGD GVGKSCLL + R ++++ K+IKLQIWDTAGQERFR +T +YYRGA G LLVYD+T ++N Sbjct: 8 IFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYN 97 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |