CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABC_DICDI (Ras-related protein RabC OS=Dictyostelium discoideum GN=rabC PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.379e-16 Identity = 41/91 (45.05%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTI--ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L K++L+G+SGVGKS +L+R ++TI + G+ +KLQ+WDTAGQERF++IT +YRG+ G+++VYDVTD SF Sbjct: 6 LYKIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETGQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDVTDPKSF 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 + K++LIGDS VGK+ +L R + RT+ + K +K QIWDTAGQER+R +T+AYYRGA+G +LVYD+T +F+ Sbjct: 15 VFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFD 104
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 K+LLIGDS VGK+ ++ R K++ +++DGK++ L IWDTAGQE+FR + ++YYRGA GI+L YDVT SF++ Sbjct: 8 KVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDN 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPT4_SCHPO (GTP-binding protein ypt4 OS=Schizosaccharomyces pombe GN=ypt4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15 Identity = 48/106 (45.28%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIEL----DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSL 463 L+K++L G SG GKSCLL R R I + KRIKLQIWDTAGQE+FR++ YYRGA G +LVYDVT++ SF S IR++ Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAM 114
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RASEF_DANRE (RAS and EF-hand domain-containing protein OS=Danio rerio GN=rasef PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 +L+L GD+G GKS LLR +I+ + +DG++ LQIWDTAGQERFR+I +Y+R A G+LL+YDVT ESSF Sbjct: 469 RLVLAGDAGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEKTNLQIWDTAGQERFRSIARSYFRKAHGVLLLYDVTSESSF 555
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB33B_HUMAN (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFR-TITTAYYRGAMGILLVYDVTDESSFNS------NCSLHFIIRSL 463 + K+++IGDS VGK+CL R + R +E+DG+RIK+Q+WDTAGQERFR ++ YYR ++ VYD+T+ +SF+S C H + + Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDI 141
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB33B_PONAB (Ras-related protein Rab-33B OS=Pongo abelii GN=RAB33B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFR-TITTAYYRGAMGILLVYDVTDESSFNS 430 + K+++IGDS VGK+CL R + R +E+DG+RIK+Q+WDTAGQERFR ++ YYR ++ VYD+T+ +SF+S Sbjct: 33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHS 124
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L K +L GDSGVGK+ +L R KI+T+ ++GK IKLQIWDTAG++RFR + ++YRG G+++VYDVTD+ SF + Sbjct: 8 LFKFVLAGDSGVGKTSILFRITDDTFTETHITIGIEF-KIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFEN 96
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB40C_MOUSE (Ras-related protein Rab-40C OS=Mus musculus GN=Rab40c PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 L+K LL+GDS VGK +L K TI LDG+R+KL++WDT+GQ RF TI +Y RGA GILLVYD+T+ SF+ Sbjct: 14 LLKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFD 103
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB40C_HUMAN (Ras-related protein Rab-40C OS=Homo sapiens GN=RAB40C PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 L+K LL+GDS VGK +L K TI LDG+R+KL++WDT+GQ RF TI +Y RGA GILLVYD+T+ SF+ Sbjct: 14 LLKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFD 103 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |