CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 KL+L+G+S VGKS L+LR +T+ LD +K +IWDTAGQER+ ++ YYRGA ++VYD+T+E SF Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESF 108
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--SNCSLHFIIRS 460 L+K++++GDSGVGK+ L+ + + IE+D K++ +QIWDTAGQERF+++ +A+YRGA +LV+DV + SF+ N FII++ Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQA 110
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L+K LL+GD VGKS +L K TI LDG+R+KL++WDT+GQ RF TI +Y RGA G++LVYD+ + SF Sbjct: 14 LLKFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSF 102
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB40A_HUMAN (Ras-related protein Rab-40A OS=Homo sapiens GN=RAB40A PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 L+K LL+GD VGKS +L K TI LDG+R+KL++WDT+GQ RF TI +Y RGA G++LVYD+ + SF Sbjct: 14 LLKFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSF 102
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB33_CIOIN (Putative Ras-related protein Rab-33 OS=Ciona intestinalis GN=COS41.2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFR-TITTAYYRGAMGILLVYDVTDESSF 424 + K+++IGDS VGK+CL R + RT+++DG++IKLQ+WDTAGQERFR ++ YYR ++ YDVT SF Sbjct: 15 VFKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRERTLDIDGEQIKLQLWDTAGQERFRKSMVPHYYRNVHAVVFTYDVTKGRSF 104 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |