CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RASEF_CAEBR (RAS and EF-hand domain-containing protein homolog OS=Caenorhabditis briggsae GN=tag-312 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13 Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 ++++ GD+ VGKS ++R ++T+ +DG+ + LQ+WDTAGQERFR++ +Y+R A G +LVYDV E SF Sbjct: 441 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEHSF 527
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 K++L+G S VGK+ L LR RTI ++G +IK IWD+AGQ+RFR++ T YYRGA +LV+D+T + +F+ Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFD 98
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 161 IKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 +K ++ G VGKS LLL+ + R+I +D +IKL+IWDTAGQE FR+ITT YYRGA LL YD+T SF Sbjct: 6 LKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSF 93
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--SNCSLHFI 451 L K++L+GD GVGKS L+ R + +E+DG + +QIWDTAGQERFR++ T +YRG+ LL + V D SF SN FI Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI 106
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN--SNCSLHFI 451 L K++L+GD GVGKS L+ R + +E+DG + +QIWDTAGQERFR++ T +YRG+ LL + V D SF SN FI Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI 106
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB21_RAT (Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 K++L+G+ VGK+ L+LR + + + GKR+ L IWDTAGQERF + YYR + G +LVYDVTDE SF Sbjct: 19 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSF 105
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB21_MOUSE (Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 K++L+G+ VGK+ L+LR + + + GKR+ L IWDTAGQERF + YYR + G +LVYDVTDE SF Sbjct: 19 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSF 105
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 2 Query: 164 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN 427 K++L+G+ VGK+ L+LR + + + GKRI+L IWDTAGQER+ + YYR + G ++VYD+TDE SF+ Sbjct: 18 KVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFH 105
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGK----------RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 LIKLL +GDSGVGK+ L R + + + + + ++ LQ+WDTAGQERFR++TTA++R AMG LL++D+T + SF Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF 107
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELD--------GKRIK--LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 424 LIKLL +GDSGVGK+ L R + + + + GK K LQ+WDTAGQERFR++TTA++R AMG LL++D+T + SF Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF 107 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |